Colletotrichum higginsianum: CH63R_01991
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Entry
CH63R_01991 CDS
T08176
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_01991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_01991
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_01991
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH63R_01991
Spliceosome [BR:
chig03041
]
Complex A
U1 snRNP components
U1 related factors
CH63R_01991
Complex B
CH63R_01991
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Pre-60S particles
Helicases
CH63R_01991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Helicase_C_2
P-loop_SecA
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
28861073
NCBI-ProteinID:
XP_018161782
UniProt:
A0A1B7YMI3
LinkDB
All DBs
Position
2:818769..821213
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AA seq
550 aa
AA seq
DB search
MSYGGGYGGGGRGGGGGYGGGGGGYGGGRDRSDRGGRDGGYGGGGFNGDSNGYGGGGGGY
GGGGYGGGGGGDRMNNLGAGLRTQEWDINTMPKFEKSFYKEHDEVANRSPEDVEAFRRKH
QIAIAGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAET
GSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTC
VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEP
QIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLTDFIQVNIGSMELAANHRITQVVEVV
NESEKRDRMIKHLEKMMDNKENKVLIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNER
DWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGALGT
AVTFFTTDNSKQARDLVNVLREAKQEIDPRLAEMTRYGGGGGGGRYGGWGRGRGGGRGGG
GGRTFFIPKS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggcggcggatacggtggcggcggtcgcggcggcggtggcggctacggagga
ggtggtggtggctacggcggtggtcgcgatcgcagtgacagaggcggtcgcgatggcggc
tacggcggtggtggtttcaacggtgacagcaacggctacggtggtggcggtggtggttac
ggtggtggtggttacggcggcggcggcggcggcgaccgcatgaacaaccttggcgccggc
cttcgcacgcaagaatgggacatcaacacgatgcccaagttcgagaagtctttctacaag
gagcacgatgaggtcgccaaccgcagccccgaggatgtcgaggccttccgccgcaagcat
cagattgccattgctggcagcgatgttcccaagcctgtcgagaccttcgacgaggctgga
ttccccagatatgtcatggacgaggtcaaggcccagggcttccccgctcccaccgccatt
caatcccagggttggcctatggctctctccggtcgcgatgtcgtcggtattgccgagact
ggttccggaaagacgctcacctactgccttcccgccatcgttcacatcaacgcccagccc
ctcttggcccccggcgatggtcccatcgtcctgatccttgctcccacccgtgagctcgcg
gtccagattcagcaggagatttccaagttcggcaagtcctctcgcattcgcaacacttgt
gtctacggtggtgtccccaagggcccccagatccgcgacctctctcgcggtgtcgaggtc
tgcattgcaacccccggacgtctcatcgacatgctcgaggctggcaagaccaacctgcgc
agagtcacctacctggttctcgacgaggctgatcgcatgctggatatgggtttcgaaccc
caaattcgcaagattatcggccagattcgccccgaccgtcagaccctcatgtggtctgcc
acttggcccaaggaggtccgcgcccttgcctcagacttcctcaccgacttcatccaggtc
aacatcggctccatggagctggctgccaaccaccgcatcacccaggttgtcgaggtggtc
aacgagagcgagaagcgtgatcgcatgatcaagcacctcgagaagatgatggacaacaag
gagaacaaggttctcatcttcgtcggcaccaagcgtgttgccgatgagatcacccgattc
cttcgccaggacggatggcccgcgctttccatccacggtgacaagcagcagaacgagcgt
gactgggttctggaccagttcaagacgggcaagagccctatcatggtcgctaccgacgtc
gcgtcgcgtggtattgatgttcgcaacattactcacgtgctgaactacgactaccccaac
aactcggaggactacatccaccgtatcggccgtaccggtcgtgctggtgccttgggtacc
gccgttaccttcttcaccactgacaactccaagcaggctcgcgacctcgtcaacgtcctc
agggaagccaagcaggagattgaccctcgtctcgctgagatgacccgctacggcggcggt
ggtggtggtggtcgctacggcggctggggccgtggccgcggtggtggccgtggcggtggc
ggtggtcgtacgttcttcatcccaaagtcttag
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