Colletotrichum higginsianum: CH63R_02112
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Entry
CH63R_02112 CDS
T08176
Name
(RefSeq) S1 RNA binding domain-containing protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_02112
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
Other 90S particles
CH63R_02112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_19
HAT_Syf1_CNRKL1_C
Suf
DUF2187
AEP1
Motif
Other DBs
NCBI-GeneID:
28861194
NCBI-ProteinID:
XP_018161903
UniProt:
A0A1B7YMU8
LinkDB
All DBs
Position
2:1167075..1172496
Genome browser
AA seq
1770 aa
AA seq
DB search
MSSLKRKDAPGGTPPSKSAKASKVSRPSKRDTPTKDRTTATADAPALKAPAVSALLKDEE
PLFPRGGGSILTPLEQKQITMEAKADAAKEEAELFDPNVKSKAKKEKRRKAKDTKDVKPA
RDEDAVKIEGLNFKRLVKGSLVLGQITHIDTVQLTIALPNNLTGHVSIASISDTTNSKLE
KDLNAADEESDDDEEEDDEGIDLKSMFKIGQYVRTHVLSTADESGPGKAKRRIELSLRPA
EANAGITGDDVVAHTTLMASIASVQDHGYEMDLGIEGDLKGFLPKKEVGPDMDEASLRPG
AVCLCVVKSVTGIVVQLSTDPLKLGNTSLVASTAPTINSFLPGSLADVLLTEVTSRGIQG
KLLGHLPVTADLIHSGVGPDNVDLEAKYTVGTRVKARIICNFPAAREPKLGISLLPHIVG
LQPKSSGKGSRAKAPLDILPIASFVEKCTVRKVEPEIGLYVDTGVPGIAGFVHISRVKDG
KVDALYETSGPHKVGSTHRGRVVGYSSLDGMFLLSFEQNILDQPFIRLEDVPVGEVVSGK
IEKVIVGENGVSGLIVKLAEGITGYVHESHLADVKLQHPEKKFREGITVKARVLSVRPRK
RQLRLTLKKTLVNSDAPIVKNYDDAEVGMQTPGTITGFTAAGAQLEFFGDVRGFLPLSQM
SEAYIKDPKEHFRVGQVVSVHVLDVNPEERRMVVSCKDPSAFGLDKQAALKALKIGDIVS
AKVSQKTEDEVFVDLEESGLKAIIRTGHLSDKSASKTQAAWKRINVGNLLSDLVVLDKNE
RRRAVILTQKPSFAEASKKGTLLSSAEDVTVGAVVPAYVREIGPFAVYVQFGGSLTGILP
KAKLPKDAQEKPAFGMRKHQSIEVKIVSSNPEQNRIIVAPASADEPAPIAPESAVNSVDD
SIKTINDIALGTILNAKVMSIKNTQLNVKVADNIQGRIDVSQFFDAWENIKNLKNPLQQV
KANEIIRVRAIGIHDSKNYRFLPFSHRSTHSLIEFTAKASDIKAKEVELLSYDKIEVGSS
HVAFVNNHGKNCLWVNLSPTVRGRISIMDVSDDLSHAGNLEKYFPVGSALKVRVLSVDAD
KGHLDLSSRSSTGSSEVTWDSLKKNMTLPGRVTKVNDRSVMVKLSDSVSGPVHLVDLCDN
YDEANTLKYTKGEIIRVSVVEVDKSNKRLRLSTRPSRILSSTSPVADREITKLPQISSGD
IIRGFVKNVTDKGVFVQLGGTVSAYVKIGNLSDRYIKDWKGNFQVDQLVKGRVINVDTAI
NQVELSLKASVVENDYTPPVTYKDIKEGQIVTGKVRKVEEFGAFIVVDNSHNVSGLCHRS
EMAEKPVEDARRLYSEGDVVKAKILSVDDERKRITFSLKPSHFDEDSDMEDVEGGAELAS
DEDSDVEMGDGGVQLTISGTDNFDDSDEDEDDEEEEEEEDDSDVEMEDKAATGKGLSAGK
YDWTGDAFDESDGESTSKTKKPTATEKKEKKQSGIQVDRTADLDAHGPQTATDYERLLLG
EPDSSQLWIQYMALQMKVSELAKAREIAERAIKTINIREQMEKLNVWIAYLNLEVAYGTK
ASTEEVFKRACQYNDEQEVHERLASIYIQSGKLKQADDVFQSLVAKFKSKSPKVWENYAH
FLHVTMNEPDRARALLPRATQALEERHTAQLMASFGALEFKSPNGDAERGRTTFETILAT
WPKRFDLWNQLADLEISAAEPDATAIRDVFERGAKAKGLKPKKAMKWFKRWAEWEQKLSP
KGRDKVMAKAQEWVTAAKAKKGAAEEDDEE
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctcaagcgaaaggatgcccccgggggtactcctccatcaaagtcggcaaag
gcctcgaaggtgtcccgaccctcgaagcgcgacactcccaccaaggaccggacgacggcg
actgcagatgctcctgcgctgaaggctcccgccgtctcggcactgctcaaagatgaagag
cccttgttccctcgtggcggtggaagcattctcacgccgctcgagcagaagcagatcacc
atggaggcgaaggccgacgctgccaaggaggaggccgagctgttcgaccctaacgtgaag
agcaaggcaaagaaggagaagagaaggaaagccaaggacaccaaggatgtcaagcccgca
agagatgaagatgctgtcaagattgagggtctcaacttcaagcgacttgtgaagggctct
ctggtcctcggtcaaatcactcatatcgacactgtccagctcacgattgcactgcccaac
aatctcacaggacatgtttcgatcgcctcaatctcagacacgacaaactcaaaactcgaa
aaggaccttaacgccgccgacgaggagagcgatgacgacgaagaggaggacgacgaggga
atcgacttgaagtccatgttcaagatcggccagtacgtccgcacacacgtgctgtcgaca
gcagacgagtcgggcccgggcaaagccaagcgccgaatcgaactttcgctccgacccgca
gaggccaacgctggcatcaccggcgacgacgtcgttgcgcatactacactcatggcctcg
atcgccagtgtccaggaccatggttacgagatggatctgggaatcgagggagatctgaag
ggcttcctccccaagaaggaagtcggccccgatatggacgaagccagcctgcggcctggt
gccgtctgtctttgtgttgtcaagagcgtgactggaatcgttgtccagctgtcgaccgac
cctctcaagctcggcaacacatcgcttgttgcatcgaccgccccgacaatcaactctttc
ttgcccggatccctggccgacgtcctgctcactgaggttacctcgagaggtatccagggc
aagttgcttggtcacctgcccgtcactgctgacctcatccactctggtgttggtcctgac
aatgtcgacctcgaggccaagtacaccgtcggcaccagagtcaaggcaagaatcatttgc
aacttccctgctgcgcgcgagcccaagctcggtatctctctgctgccgcacattgtcggc
ttgcagccaaagtcatcgggcaagggcagcagagccaaggctcctcttgatatacttccc
atcgcctcgtttgtcgagaagtgcactgtccgcaaagtcgagcctgagattggtctctac
gtagacactggcgttcccggcattgctggcttcgtgcacatttctcgcgtcaaggacggc
aaggttgatgcgctttacgaaacgagtggcccccataaggtcggctctacgcatcgcggt
agagtcgttggctacagctcgctggatggcatgttcctgctgtcattcgagcagaacatt
cttgatcagcccttcatccgcctcgaggacgttcccgtgggagaggttgtctctggcaag
atcgaaaaggtcattgtcggcgagaacggcgtcagtggtctgatcgtcaagctggccgag
ggcatcactggttacgttcacgaatcgcaccttgccgacgttaagcttcagcacccggaa
aagaagttcagagagggaatcaccgtcaaggcgagagttctctcagtgcgccctcgcaag
cgccagctccgcctgacgctcaagaagaccctggtgaactcggatgcgcccattgtcaag
aactacgacgatgccgaggtcggcatgcagacacctggaaccatcactggcttcaccgcc
gctggcgcacaactcgagttcttcggagacgtaaggggtttcctgcccctgtcccagatg
agcgaggcctacattaaggatcccaaggagcacttccgcgtcggccaggttgtcagtgtc
cacgtccttgatgtcaaccccgaggaacgcaggatggttgtttcttgcaaggacccctca
gcatttggcctggacaagcaagcagcactcaaggctctgaagattggcgatattgtgtcc
gccaaggtcagccagaagacggaggatgaagtctttgttgatcttgaggagagcggcctc
aaggccattatccgcaccggtcatttgtcagataagtctgccagcaagactcaggctgct
tggaagcgcatcaacgttggaaacttattgtcggacctcgtcgtgcttgacaagaacgag
cgccgtcgcgcagtcattctcacccagaaacccagctttgctgaggccagcaaaaagggc
acactgctgtcgagcgctgaggacgttactgtcggtgctgttgttccggcctacgtccgt
gagattggtcccttcgccgtctacgtccagtttggcggcagccttaccggcatcctgccc
aaggctaagttgcccaaggatgcgcaggagaagccggccttcggcatgcgcaagcaccag
agcatcgaggtcaagattgtgtcttccaaccccgaacagaaccgcatcattgttgcccct
gcatccgccgacgagcccgcaccgatcgcgcccgagtctgccgtgaactccgtcgacgac
agcatcaagaccatcaacgatatcgctcttggcacgatactgaacgccaaggttatgtct
atcaagaacacccagttgaacgtcaaggttgcggacaacatccagggccgtatcgacgtt
tcgcagttcttcgacgcgtgggagaacatcaagaacctcaagaaccccctgcagcaggtc
aaggcaaacgagatcattcgtgtccgcgccattggcatccacgactccaaaaactaccgc
ttcctgccattctctcatcgttctacccactcgctgatcgagttcaccgcaaaggcgagt
gacatcaaggccaaggaggtcgagctgctttcatacgacaagatcgaggttggctcttcg
cacgtcgccttcgttaacaaccacggcaagaactgcttgtgggtcaacttgtcgcctact
gtccgtggcagaatcagcatcatggacgtctcggacgacttgtctcacgccggaaacctc
gagaagtacttccccgtgggatctgctctcaaggtccgcgtcttatccgtcgatgccgac
aagggacacctagacctgtcttctcgttcctccacaggctctagcgaggttacgtgggac
tcgttgaagaagaacatgacccttcccggcagagtcaccaaggtcaatgatcgttctgtc
atggtcaagctcagcgattccgtctctggccctgtccatctggtcgatctttgcgacaac
tacgacgaagccaacactctcaagtacaccaagggcgagattatccgcgtctcagtggtc
gaggtggacaagagcaacaagagactcaggctttctacccgcccgtctcgcattctcagc
tccacctcccctgttgccgatcgtgaaatcaccaagctgcctcagatctcctcgggtgac
attattaggggtttcgtgaagaacgtgaccgataagggcgtttttgtgcagctcggaggc
actgtctccgcctatgtcaagatcggcaacctctcggaccgttatatcaaggactggaag
ggcaacttccaggttgatcagctagtcaagggccgtgtcatcaacgtcgacacagcaatc
aaccaggtcgagctgagtctcaaggcttccgtcgtcgagaacgactacacaccccctgtg
acgtataaagacatcaaggagggacagatcgtcaccggcaaggttcgcaaggttgaggag
tttggtgccttcattgtcgtcgacaactctcacaatgtcagcggtctgtgccatcgcagc
gagatggccgagaagcccgtggaggatgctcgtaggctttacagcgagggcgacgtggtg
aaggctaagatcctgtctgtagatgacgagagaaaacgcatcactttcagtctcaagcct
agccacttcgacgaggacagcgatatggaggatgtcgaaggaggtgctgaactggccagc
gatgaggattccgacgttgagatgggagatggtggtgtccagctcaccatcagtggaaca
gacaactttgacgactcggatgaggacgaggatgacgaagaggaggaggaggaagaagac
gacagtgatgtcgagatggaggacaaagcagccactggcaagggcttgagcgctggcaag
tatgactggacgggtgacgcattcgacgaatcggatggcgagtcaacaagcaagacgaag
aagccgacggcgacggagaagaaggagaagaagcagagcgggatccaagttgaccgcacc
gccgacctcgacgcccacggaccccaaaccgccaccgactacgagcgtctcctcttggga
gagcccgactcgtcccaactctggatccagtacatggctttgcagatgaaggtcagcgag
ctggccaaggcacgtgagattgcggagcgcgccatcaagaccatcaacatccgcgagcag
atggaaaagctcaacgtgtggatcgcctacctcaacttggaggtcgcttacggcaccaag
gcgtccaccgaggaggttttcaagcgtgcttgccagtacaacgatgaacaagaggtccac
gagcgtctggccagcatctacatccagtccggaaagctcaagcaagcagatgatgtcttc
cagtcactcgtggccaagttcaagtcaaagtcgcccaaggtctgggagaactacgctcac
ttcctgcacgtgacgatgaacgagcccgacagggctcgcgcgctcctgccgcgtgccacc
caggcactggaggagcgacacacggcgcagctgatggccagcttcggcgctctcgagttc
aagtcgcccaacggcgacgccgagcgcggccggacgacgttcgagacgatcctcgcgacg
tggccgaagcggttcgatctgtggaaccagctggcggacctcgagatctcggcggcagag
ccggacgcgacggcgatccgggacgtttttgagaggggcgccaaggccaagggtctgaag
cccaagaaggcgatgaagtggttcaagcggtgggctgagtgggagcagaagctgagccct
aagggccgggacaaggtgatggccaaggcacaggagtgggttacagcggcaaaggccaag
aagggcgccgccgaggaggacgacgaggagtaa
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