Colletotrichum higginsianum: CH63R_02232
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Entry
CH63R_02232 CDS
T08176
Name
(RefSeq) SNF2 super family protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
chig
Colletotrichum higginsianum
Pathway
chig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH63R_02232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_02232
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_02232
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CH63R_02232
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
CH63R_02232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
KIF21A
Motif
Other DBs
NCBI-GeneID:
28861314
NCBI-ProteinID:
XP_018162023
UniProt:
H1VQR2
LinkDB
All DBs
Position
2:1564011..1567525
Genome browser
AA seq
1153 aa
AA seq
DB search
MAFNKESIQGGGESGDERGSRAGAVKDNTKDAKEPHLGDHSDEATFLRNITADIRDQDDL
ERDITTQANVALIEAEDKKDKQRIEKLEANKEKLEAKRTEQQKKLEGARRNPYQSRTIQK
EIDKLDLEIDGVINDIADCQARIDARQEEVTVIEDPVKSKSRRLPGESNREFLVRTGKIT
PFANIGGERPAGFEGDLADVLVEAEEDAAAEEFQSDDEEPKSHQVLRMPGFTEQPETALT
PVESEFSLRPRKKRKTEEDASSDDFDPAAASSPESQYASDTSEEEATGRKRRKGKAKKKS
ADATVTVGGTKVDLSSVDDGNEAVYQARLADWVRRRSRARQHRTGIDGEPAAQDDGEEEW
FKPSPDHPDHEFGNNLRLPGDIHPSLFAYQKTGIHWLAELYEQGVGGIIGDEMGLGKTVQ
AIAFVAALHYSKKLDKPVIVVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMVNVNEDD
DDESHYRSGRNGAAAHHIVKRVVKHGHVLVTTYAGLQSYEDDLLSQEWGYAILDEGHKIR
NPNAEVTIACKKLNTPHRLILSGTPIQNNLVELWSLFDFIFPMRLGTLVNFRHQFEMPIR
MGGHANATNLAVLTAEKCATTLKETISQYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNE
EYVRFIHSDAVSQIMARKRQALYGIDILRKICNHPDLVNVSKKSQPGYDWGSPRRSGKLQ
MVGELLPMWKRFGHKTLLFSQTKIMLNILQEFIGKMEGMRYLRMDGEVAVEKRQALIDRF
NNDPSIDVFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAWRLGQTKPVAIYR
LMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRANFDLSDLYDLFSFGDNSHSMASANRSK
VFEGAEVKFGQPEANKNLEKPSKNAVPISSVKADDEVDAVRKLAGVAGMEEFTEDKAPED
EKRITESLFSRTVESAYEHDQIMNGKKRVQADPAMNQREAGRVAAQAAAALRQAGEVARR
TPIGTVTWTGEVGEAGRPVAQRRRGGASSSAIMSSLADRQGLSRPASGPSSRSGTPGGVD
KNLKEKDFIPLIQTFIRRQGGKAPSKMVVDHFNPYCQKPKQIEEFKSALAKVAVLSKSGG
TGRGIWNLRPAYK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaacaaggaaagcatccagggtggtggcgagtctggggatgaaaggggcagc
agggctggcgccgtcaaagacaataccaaggatgcaaaggaacctcacctaggcgaccat
tccgacgaggcaacattccttcgaaatatcactgctgacatccgggaccaagatgatctg
gagcgtgacatcaccacacaggccaacgttgctttgattgaagcagaagacaagaaggat
aagcagcgcatcgagaaactggaggcaaacaaagaaaagctcgaggccaagaggaccgag
cagcaaaagaaactggaaggggctcgtcgtaacccataccagtcgcggacaattcagaag
gaaatcgacaagcttgaccttgagattgacggcgtcatcaacgacattgccgattgccaa
gcccgcatcgatgcgaggcaagaggaggttacagtcatcgaggatcctgttaagagcaag
tcccgaagactcccgggcgagtcgaaccgagagttcctcgtccgaactggaaagatcaca
ccattcgccaacattggtggcgagcggccggctgggtttgaaggcgatcttgcggatgtc
ctcgtcgaggccgaggaagatgcggcagcggaggaattccagagcgatgacgaagagccc
aagtctcaccaagtgctgcggatgcccgggtttacagagcagcccgagaccgcgctcact
cctgttgagagcgaattctctctgcgccctagaaagaagcgcaagacggaagaggatgca
tcttccgacgactttgatccagcggccgccagttcgccagagagtcagtacgcatccgac
acgagcgaggaagaggcgactggccgcaagcgaaggaagggcaaggcgaagaagaagtcc
gcagacgccacagtcaccgttggtggcacaaaggtagatttgagcagcgttgatgatgga
aacgaggcagtgtaccaagcacgtcttgccgattgggtcagaagacgcagtagagcacgc
caacatcgaaccggtattgacggagagcctgcggctcaggatgacggcgaagaagagtgg
ttcaagccttcgcctgaccacccagatcacgaattcggtaacaacctgaggctccccggg
gacattcatccgtcgcttttcgcctatcaaaagaccggtatccactggcttgcagagctc
tatgagcagggtgttggcggcatcatcggtgacgagatgggattgggaaagacagtgcag
gcaatcgcattcgttgcggcgctgcattatagcaagaagcttgacaagcccgtcattgtc
gtcgtccctgcgacagtgatgcagcagtgggtcaacgagtttcaccgatggtggcccgcc
ttgcgagtgtcgattctacactcgtcaggcagcggcatggtgaacgtgaatgaggatgat
gacgatgaatcccactacaggagtggcaggaatggcgctgcggcgcatcatatcgtcaag
cgcgttgtcaagcatggtcatgtcctggtcacgacctacgccggcttgcagtcctacgag
gacgacctcttgtctcaggaatggggatatgcgatcctcgatgaaggtcacaagatccgg
aacccgaacgcagaggtcaccattgcatgcaagaagctcaacaccccgcatcgattgatc
ctctctggcacaccaatccagaacaatttggtcgagctttggtcactgttcgatttcatc
tttcccatgcgactgggcacgctcgtgaacttcagacaccagtttgagatgcccatccgt
atgggcggccacgcgaatgcaaccaatctcgcggttttgacggccgagaagtgcgcgacg
accctcaaagagaccatcagccaataccttctccagcgactcaagaccgacgttgcgtca
gatttgccagagaagaccgagcaggtgctcttctgtaagctgaccccggagcaaaacgag
gagtacgtcaggttcatccactccgatgccgtctcccagatcatggccagaaaaagacaa
gctctgtacggcatcgatattctgcggaagatctgcaatcatccagatctcgtcaatgtg
agcaagaagagccagccgggctacgattggggaagtcccagaagatccggcaagttacag
atggtgggcgaactcctcccgatgtggaaacgcttcgggcacaagacactcttgttctct
caaaccaagatcatgcttaacattcttcaagagttcattgggaagatggagggcatgaga
taccttcgaatggatggcgaagtggctgtagaaaagagacaggccttgattgaccgattc
aacaacgacccgtcgattgacgtctttctcctcactaccaagacaggcgggctgggtgtt
aacctgactggagcaaccaggatcgtcatatacgaccctgactggaatccgtcaacggat
ttgcaggccagagagagagcctggcgactgggccagacaaaacctgtcgcgatttataga
ctgatgacatcgggcaccatagaggagaagatctatcaccgtcagatcttcaagcaattc
atgacgaacaaggtcctcaaggacccgaagcagcgggccaacttcgacctatccgacctc
tacgacctcttcagtttcggcgacaacagccatagcatggcgagcgccaacagaagcaaa
gtgttcgagggtgccgaggtcaaatttggccagccggaagctaacaaaaacctggagaag
ccctccaagaacgcggtccccatctcctccgtcaaggccgacgacgaggttgacgcagtc
cgcaaacttgccggcgtcgccgggatggaggagttcaccgaggacaaggctcccgaagac
gagaaacgcatcacagaaagcctattttcccggaccgtcgagagcgcctatgagcatgac
cagattatgaatggcaagaaacgggtgcaggcggatccggcgatgaaccagcgagaggcg
ggcagggttgccgcacaggcggcagctgctctccgacaggcgggcgaggtggcgcgtcgc
acgcccatcggcaccgtcacctggaccggcgaggtcggcgaagccggccgtcccgttgcg
cagcgtcgacgcggaggagcgagctcctcagccatcatgtcttcattggctgaccgccag
ggactcagccggccggccagcgggccgagttcgcgatcgggcactcccggcggcgtggac
aagaatctcaaagagaaggacttcattcctttaatccagactttcattaggcggcaagga
ggcaaggcgccttccaaaatggtggtggatcacttcaacccctactgccagaagccgaag
caaatcgaggagttcaagagtgccctggccaaggtggccgtgttgagcaagtctggcggc
actggaaggggcatttggaatttgaggcctgcttacaagtag
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