KEGG   Colletotrichum higginsianum: CH63R_02243
Entry
CH63R_02243       CDS       T08176                                 
Name
(RefSeq) A49-like RNA polymerase I associated factor
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
chig  Colletotrichum higginsianum
Pathway
chig03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CH63R_02243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chig03021]
    CH63R_02243
Transcription machinery [BR:chig03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     CH63R_02243
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 28861325
NCBI-ProteinID: XP_018162034
UniProt: H1UY50
LinkDB
Position
2:complement(1588696..1590146)
AA seq 440 aa
MADANGRKRKRDLDGSSKSKKKLATEPSTVSVSSVLRPQLCPPVLASAPGVRLPNSIPFN
PYVKQDALSGKRRQKAPAVSQDLVLHSSSHQTMDYTAREDGISDSQQALKHYVGIFDPKT
GTLQVVEAKKMVVRGVARAKHAPEGAMRAPADNQSYYDLKKDLGQTFGTKKAKKAIESVA
LNAIDPNKTRDSAPKELDTASKAILREIGGVTATMASRDQLQAAVDEAKPVPRPNLEAEA
IQDVYDPDEFIGREILAAVPVKDWIDPAKNGEEILCYSRHVASRVKKVADSGSVAKMRLL
RYFYFLFTFYIMAAPGKQRGTKRVPPRDKLKERMSPAPQVVIEQIRRKFSDGGEMRKFHL
DLLVTHCCAIACIIDNFEVDTSQLREDLRLDQKDINNYFYEIGAKVKQVATKEKGRPAHV
AKLALPLNFPKLRSVAPKRR
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcggacgcaaacggacggaagagaaagcgcgacctcgacggctcgtccaagtctaag
aagaagttggctactgagccctcaacagtctccgtctcgtcggtcctgagaccccaactc
tgccccccagtcctagcctctgcacccggagtccggctacccaatagcatccccttcaac
ccgtacgtcaagcaagatgccttgtccggcaagcggcggcagaaagcccctgcggtatcg
caggacctcgtcctgcactcatccagccaccagacgatggactacacggcgagagaagat
ggcatcagcgacagccagcaggccttgaagcattacgtgggcatctttgaccccaagacg
ggaacgctccaagtggtagaggcgaagaagatggtggttcgtggtgtggccagagcgaag
catgcgccggagggggccatgagagcaccggccgacaaccagagctactacgacctcaaa
aaggatctcggccagacgtttggtacgaagaaggcgaaaaaagccatcgagtccgtcgcc
ctcaacgccatcgaccccaacaagaccagagacagcgcaccgaaagagctcgataccgca
tccaaggccattctgcgggaaatcgggggcgtcacggcgacaatggcctcgcgcgatcag
ctgcaggcggccgtcgacgaggccaagcccgtgcccaggcccaacctcgaggccgaagcc
attcaggatgtctacgatcccgacgagtttatcggccgcgagatcctcgcggcggtgcct
gtcaaagactggatcgatccggcgaagaacggcgaggaaatcttgtgctactcgcggcac
gtggcctcgcgggtcaagaaggtggccgactcgggcagcgtcgccaagatgcggctgctg
cgttacttttacttccttttcaccttctacatcatggcggcgccgggcaagcagcgtggc
acgaagcgcgtgccgcctcgcgacaagcttaaggagcgcatgtcgccggcgccgcaggtc
gtcatcgagcagatccgccgcaagttctcggacggcggcgagatgcgcaagttccacctc
gacctgctcgtgacgcactgctgcgcgatcgcgtgcatcatcgacaacttcgaggtcgac
acgtcccagttgcgcgaggacctgcggctcgaccagaaggacataaacaactatttctac
gagatcggcgcaaaggtgaagcaggtcgccaccaaggagaagggcaggcccgcgcacgtc
gccaagctcgcgcttccgctcaacttccccaagcttcgatcagtcgcaccgaaacgccgt
tag

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