Colletotrichum higginsianum: CH63R_02408
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Entry
CH63R_02408 CDS
T08176
Name
(RefSeq) DNA polymerase family A
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03410
Base excision repair
chig04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH63R_02408
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
CH63R_02408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_02408
03029 Mitochondrial biogenesis [BR:
chig03029
]
CH63R_02408
Enzymes [BR:
chig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH63R_02408
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
CH63R_02408
Mitochondrial biogenesis [BR:
chig03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
CH63R_02408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
28861490
NCBI-ProteinID:
XP_018162199
UniProt:
A0A1B7YP10
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Position
2:2169354..2172850
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AA seq
1148 aa
AA seq
DB search
MAAITNHVLRGSTASFIRLARHHASRRLALRSHARWQSSLAAETANVDNIKERQEKPNIL
SQARYSDIGVQHLSAHVYKQIFPDGTTPPPPELVELSRDHLRRHDLLGKNTDNSDPIAFD
LPELQGRTLDEHFHKLAVDSAEPYLSLAKQFARANAPPKPRKWVRRSGWTKYYSDGRTEA
VDAPDDSMLCFDTEVLWKESSFAVMACASSPTAWYAWLSPWLLGESESDRHLIPLGDPTK
ERVIVGHNVGYDRARILEEYDVKQTRNSFMDTMSLHVAVNGMCSQQRPTWMKHKKSRELR
DKIASQTDDVQLAELLGNSALRQEEEELWVDRSSVNSLRDVAKFHLDVTIDKAVRDEFGT
LDRAGVLGKLDNLLDYCAADVAITHRVYQIVFPNFLDTCPHPVSFAALRHLSSVILPVNK
TWDAYIHNAEATYRELSDAVQERLIGLTEQALAIKDDPEKWGNDPWLKQLDWSGQEIKMV
KGKKKNDPPRPAARQKMPGMPQWYKDLFPKNDSPINITVRTRIAPILLKLSWDNHPLFWS
DKYGWTFRVAASEAADYQQKQMIQCDFSDTESDAALQEDGGLFFKLPHKDGPMARCVNPM
AKGYLSYFEKGTLSSEYPYAKEALEMNASCSYWISARDRIRSQMVVYEDDIPGEGKEASS
KKKRDPEHVQGYILPQIIPMGTITRRAVENTWLTASNAKKNRVGSELKSMVKAPPGYSFV
GADVDSEELWIASLVGDATFKLHGGNAIGFMTLEGTKAAGTDLHSRTASILGITRNDAKV
FNYGRIYGAGLKFAGQLLRQFNPNLSEKETNETASRLYAKTKGTKTSRSVLSKRPFWRGG
TESFVFNKLEEFAAQERPRTFVLGAGITEALMRRFINQNGYLTSRINWAIQSSGVDYLHL
LIVGMDYLTRRFNIDARLAITVHDEIRYLVRDHDKYRAAMALQVANVWTRAMFAQQVGIN
DLPQSVAYFSAIDIDHVLRKEVDMDCVTPSHKTAIPPGESIDITALLAKGAEACLDPSIV
PDPAHAPKLDGIEYTPRTPVMDTLEDSTSADPYFLKAQIVSTEIELSQVLKDRRQAVKVQ
EEKKPRAARPKKERSVLPYQSDAKLVPTMTVSDAFGHNKYGSRFEPKNRWTTWQKEKGTG
RFGPSSRI
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaatcacaaaccacgtcctgaggggttccactgcgagcttcatccgcctagcc
cgacatcatgcttctcgccgcctcgccttgcgctctcatgctcgctggcagtcttcgctt
gctgcagagactgcgaacgtcgataacatcaaggagcgacaggaaaagccgaatatcttg
tcgcaggcgcgctacagcgacattggcgtccagcacctcagcgcccacgtgtacaagcag
atattccccgacggaaccacgccgccgccaccggaactcgtagagctctccagggaccac
ttgcgccgtcacgatctgctcggaaagaacaccgacaacagcgaccccatcgccttcgac
ctccccgagctgcaaggacgaaccctagatgagcacttccacaagcttgcggttgactct
gccgaaccttacctgtcgctcgcgaaacagtttgcgagggcgaacgcaccgccaaagccg
cggaaatgggtccgccgcagtggatggaccaaatactattcggacggcaggacggaagcc
gttgacgcgcccgatgattccatgttgtgttttgataccgaggtcttgtggaaggagagc
tcgtttgccgtcatggcttgcgcctcgagtccgacggcttggtatgcctggctgtcccct
tggctgctgggcgagtccgaatccgatcggcacttgatcccactgggcgacccaacgaaa
gagcgagtgatagtaggacacaatgtcggatatgaccgagcgagaatactggaagagtac
gacgtaaagcaaacgcgcaactccttcatggataccatgtcgctccacgtggctgtaaac
ggcatgtgctcgcagcaaagaccgacgtggatgaagcacaagaagagtcgagagctgaga
gacaagattgcgagccagaccgacgatgtacagttggcggagcttctgggaaacagtgca
ctccggcaggaggaggaggagctttgggtggaccgaagttcggtcaactcgctccgcgac
gtggccaagttccatctcgacgtcaccattgacaaggctgtacgcgacgagtttggcaca
ctcgaccgagccggcgtgttgggcaaactagacaacctgctggactactgtgctgccgac
gttgctatcactcaccgggtgtaccagatcgtgttccccaacttcctcgacacctgcccc
catcccgtcagtttcgcggcgttgcgccatctgtcgtccgtcatcttgcccgtcaacaag
acctgggacgcttacatccacaatgccgaggccacctaccgtgagctatccgatgccgtc
caggagcgtctgatcgggctcaccgaacaggccctcgccatcaaagacgacccggagaaa
tggggcaacgatccatggctgaagcagctggactggtctggccaagaaatcaaaatggtc
aagggcaagaaaaagaacgatcctccacggccggctgcgaggcaaaagatgcccggcatg
ccgcagtggtacaaggacttgttcccgaagaacgactctcccatcaacatcacagtaagg
acccgcatcgccccgatcctgctcaagctctcgtgggacaaccacccactgttttggtca
gacaagtacggctggacattccgggtggctgcgagcgaagcagcggattaccagcaaaag
cagatgatccagtgcgatttctccgacaccgagagcgatgctgcgctacaggaagatggc
ggcctcttcttcaagctaccacataaggacgggcccatggcaaggtgcgtcaacccgatg
gccaagggatacctatcctactttgagaagggcacgttgtcttcggagtatccgtacgcc
aaggaagctttggagatgaacgcgtcgtgttcgtactggatcagtgcccgcgaccgcatc
aggtcacagatggttgtgtatgaagacgatattccgggtgaaggcaaggaggcgagctcc
aagaagaagagagatccggaacacgtccaaggctacatcctgcctcagatcatacccatg
ggcaccatcacgagaagagcagtggagaacacgtggctcacggcgagtaatgcgaagaag
aacagagtcggatcggagctcaaatcgatggtcaaggcgccgccgggttacagctttgtg
ggtgccgacgtggactcggaggagctctggatcgcgagtttggtaggagacgcgaccttc
aagctccacggtggtaacgccatcgggttcatgacattggagggcacaaaggccgccggc
acggatctgcactcgcggacggcgagcattctgggcatcaccagaaacgatgccaaggtg
ttcaactacggccgcatctacggcgccggcctcaagtttgccggtcagctgctcaggcag
ttcaaccctaacctctcggagaaggagacgaacgagacagcttcgaggctttatgccaag
acgaagggcaccaagacgagcaggtcggtcctgagcaagcggccattctggcgcggcggg
acagaatccttcgttttcaataagctcgaagagtttgcggcccaagagcggccacggaca
tttgtcctgggcgcgggcatcacggaggctctgatgcgccggtttatcaaccagaacggc
tacctgacctcacgtatcaactgggcaatccagtcctcaggcgtcgactacctccatctc
ctgatcgtaggcatggactacctcactcgacggttcaacatcgatgctcggctcgccatc
accgtgcacgacgaaattcgatatctcgtcagggaccacgacaaataccgtgccgcgatg
gctctccaggtggcgaatgtttggacaagggcaatgtttgcccaacaagtgggcatcaac
gatctgcctcagtcggtggcatacttctccgccatcgacattgaccacgtcctccgcaag
gaagtcgacatggactgcgtgacaccaagccacaagaccgccatccccccgggagagagc
atcgacattactgccctactcgccaagggggccgaggcctgcctggacccttccatcgtg
cctgacccggcgcatgcgcccaagctcgacgggatcgagtacacgccacgcacgcccgtc
atggatacactcgaggattcgacatcggccgatccctactttctcaaggcgcagatcgtg
agcacagagatagagctgagccaagtgctcaaggacaggagacaggcggtcaaggtacag
gaggagaagaagccgcgcgcagccaggcccaagaaggagcgcagcgtgctgccgtaccaa
tcagacgcaaagctggtgccgaccatgacagtgtcggacgccttcggacacaacaagtac
ggttcgcgattcgaaccgaagaaccggtggacgacatggcaaaaggagaagggcactggt
cgcttcggaccgagctcgagaatataa
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