Colletotrichum higginsianum: CH63R_02591
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Entry
CH63R_02591 CDS
T08176
Name
(RefSeq) VTS1 protein
KO
K27407
RNA-binding protein VTS1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_02591
04131 Membrane trafficking [BR:
chig04131
]
CH63R_02591
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CH63R_02591
Membrane trafficking [BR:
chig04131
]
SNARE
SNARE associated proteins
Others
CH63R_02591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
28861673
NCBI-ProteinID:
XP_018162382
UniProt:
H1VEX6
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All DBs
Position
2:2817112..2818480
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AA seq
435 aa
AA seq
DB search
MSNRLSDAMNKLNVDSSRNSLARPASTATGKRQSGLDPSTINAMFPDAAAAIATEKAKFT
QQTGNPPSSNRNSAVGDSRQPLAAPTIATPGDNHDSNSQNQSGQGSKPHGGQPPMGQFVQ
PPPSAGLRSPRPQISGNQNIQNTTLTTSDKPADLPLLSPYNPSGGNWASMVNTPLVANFN
ASNSGTQADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNDAPGAPGQQGMPQNNQG
VNFPGANVVMINEHGQVLSREQMLALQAQNIGFGQHRSRPSSPGIAMQPGSGFGPMAFAS
PQNNGFLSAYDGASPLLNSGIPSVNVGQLGMGSHEGYLSDHSDMVRGRSPRGRRGSSKPP
EDPTDPTLLQDIPSWLRSLRLHKYTENLKDMKWHELIELDDKALEDRGVNALGARRKMLK
VFEQVKEAKAEGKIA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgcctcagcgatgctatgaacaagttaaacgtcgactcgtcgcggaactct
cttgctcgccctgcgagcactgcgaccggcaagcggcaatctggtctcgacccgtccacc
attaacgcaatgttcccggatgccgctgcagccattgctaccgagaaagccaagtttaca
caacagaccggcaaccctccctcatctaaccgtaatagcgccgtgggtgattcccgccaa
cccctggctgccccgaccattgccacccctggtgacaaccacgattccaatagccagaac
cagtcaggtcagggatccaaaccccacggtggccagccacccatgggccaattcgttcag
ccgcccccgtcagctggtttgcgatcccctcgtccgcaaatttcgggcaatcagaacatt
cagaacaccaccttgacaaccagtgacaagcctgcagacctgcccctcctatccccttac
aaccccagtggtggcaactgggcttcgatggtcaacactccgcttgtagctaacttcaac
gccagcaacagcggcacgcaggcggacatggtcgcaaacgctacagcaatgaagttagcg
gcattgtcaactgtcaacaaccgctttgcccttgatgatgtccgcaagtatcgccgtgcc
cgttccaacgacgcgccgggcgctcccggccagcaagggatgccccagaacaatcagggc
gtcaatttccccggtgccaatgtcgtcatgatcaacgagcatggtcaggttctcagccgc
gagcagatgcttgctctgcaggctcagaacatcggctttggccagcatcggtctcggccc
agttcccctggcatcgcaatgcagcccggcagcggctttgggcctatggcttttgcatcg
cctcaaaacaacggttttctgagtgcctacgacggcgcttctccactcctcaacagcggt
attccttccgtgaatgtgggccagctgggcatgggcagccatgagggttatttgtcggat
cactctgacatggttcgcggccgctccccccgtggacggagaggcagctcaaagccgcct
gaagacccaacggacccaaccttgttgcaggatattccaagctggctgagaagcttgcgg
ttgcacaagtacactgagaacctgaaggacatgaagtggcatgagttgatcgagcttgat
gacaaggccctggaagaccgcggggtcaacgctcttggagctaggcggaagatgttgaag
gtttttgagcaagtcaaggaggccaaggctgaaggcaaaattgcttga
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