Colletotrichum higginsianum: CH63R_02673
Help
Entry
CH63R_02673 CDS
T08176
Name
(RefSeq) BP28CT domain-containing protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_02673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_02673
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CH63R_02673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
HEAT
GNC1_N
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
28861755
NCBI-ProteinID:
XP_018162464
UniProt:
A0A1B7YPG3
LinkDB
All DBs
Position
2:3161488..3166997
Genome browser
AA seq
1801 aa
AA seq
DB search
MASSLAAQLAQIAANSKASLDIKAQKAAHSKSLIFEPRVAATQSYQTLFTICSEGFEELC
ELDGRFKPFSKTLFSEQSMSEDRTQMTTAENAELDKKVESFLRLVGSRLRLMPSIRALEW
LVRRFRIHENNTKSLITTFLPYHSIPAFVTLLSILPPKIPHEYRFLSPYIKSLTSPPRSV
LVHEAIHKADFLNTLSEYALEACRNQQQYPTLVSFWGGIMTEAVNGLLENMRSGRAAVQQ
DNNEAFLHRVGPTLAEAMSMKKVPNMQIASYMAVTIVAAKGSFDDATLSAFMEQIVHGWT
SETVRPGLVCLCILAQYRSAKQLSGKVTKALLKVQNLGEILVELGQERRVDKLTNGLCIA
FIERLCKKGDARGLPIIRAILMSKILKEKQIAVIFKSLVLAAHRLDDEVDKDGEIRKELG
STLIDLSRFSGETSEIIRTVLEEVDFDVEELEMKLDVSIRQRKALPGSQEDVEMTESKTP
APSKEDLRETIRELSTQKRALPSCLSTTTGEVYDEFSRLFLRVVSQQSEDPTLLADFDQL
PSLSRQTAVSDHTYITFFVRIWSGPYPTLARAAAVDAVRRRLSDGDGNDLDFQALIPYCL
VALVDSSKKVRRAAAELLIQIGHFFPPQSKAAKKSVWGGKNLYDDSAKVQWLEADTVSRL
LHGVILPALEECIMHEDHIRAVLHSTLDSSAKNEGSDGKKALSSAGRSSVLSFLASHVVA
TPLLRVKSNLLSVLNRIRGVSSTSRTKVLLPAFQWWASLSAEETNRLSEVEEVDQAVLHT
RFAEIVVPNDSEGLDCLLSIIKDSASAKRPELVRSISARIRAIWSSMKADTKFDVAQTML
ELSQARHASQDEEDIIADEAADFLRNVELTTEILAYFLESIQTGTKLITEPPANKRRRTS
SSEANRAVTAQASAELSATLRSVTFVLQLVDGSNPAAHPELLDSLFGTLSELQHFRTVIG
SELGYLQNLVLTSLIAMVPAYRNNKSLKIDGSGGHGDLLVNCIQKSSSPIVQNSALLLIA
SLASAAPDLVLHSVMPIFTFMGASVLRQNDDHSAHVVNQTIKEVVPPLMASLKKGKRNPV
AGATELLASFVTAYEHIPAHRKQGLFVALINTLGPDEFLYALLAMLVDRYGPNDSLMAFA
SELLGFYSAEVQLQTLARLLDLISDIFKPKPGLSATLLGVGEDLAEKKPETTALQQLTVF
PSLLSSRKLRKEITVLTERDDMDSSKIRDLYAILLRDVLALAETVKNQKALHECCGNALA
NLLNLLSIGEFIKSVENLLDHTEIDLRRKVLRALEVRVDQEGVADVASRTALLAFLPQLT
AAIRDTDDIKYKHTAVACIDKIAEKYGKKDVEAVAGAAATIAGPHCLGQPDTRLRVMALL
CLASLVDVLQDGILPIVNIAISQAILYIEQSVEEEKAANELHNAGYAFITALAQHLPYMI
SAKHLDNIFLASNKSAEANLDNEADDERLNCLRFLARKVEAKTLLASLERNWIPATETGF
DATDEWVDIFGVVVESHTKSVVTKNVTALSTILLNSLDLRRREHAKEKLGNTASQRVSKI
EASINEVALKMIYKLNDAAFRPIFTHIVEWSTQLPKQDVAGRALRRFSVYGFLQMFFESL
KSIVTNYATYIVDDAVEIIKTCDFKLPEQKELWRRVLSTLARCFEHDQDDFWQAPAHFSK
AAPVLTAQFLNASSVDLSAELIPAVVELASAADSQEHQKELNSTILRHLRSEQASVRLAA
VKCQQELAEKLGEEWLSALPEMLPYISELQDDDDEVVERETHRWIVKIEGVLGESLDSML
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctcttgctgcgcagttagcgcagatcgccgccaactccaaggcttccttg
gatatcaaggcgcaaaaggccgcccactccaagtctctgatcttcgagccgagagttgct
gcgacccagagctaccagactctttttaccatatgctccgagggcttcgaggagctttgc
gaactcgatggccgcttcaagcccttttccaagacgctcttcagcgagcagagcatgagt
gaagaccgtactcagatgaccaccgctgagaatgccgaattggacaagaaagtcgagtcc
ttcctgcgccttgtcggcagccgcttgaggctcatgccttcgatccgtgcccttgagtgg
ctcgtacggagattcagaattcacgagaacaacaccaagtctctcataacgactttcctc
ccgtatcactcgatccccgccttcgtcaccctgctttcgattctcccgcccaagattcct
catgagtaccgattcttgagcccttacatcaagtcgctcacctcgcctccgcgatccgtt
ctggtccacgaagcgatccacaaggccgacttcctcaacaccctgtccgaatacgctctc
gaggcgtgcagaaatcaacaacagtacccgactctggtctcattctggggtggaattatg
acagaggccgtgaacggacttctcgagaacatgcggtccggtcgcgccgctgtacagcag
gacaacaatgaagcttttctgcaccgcgtcgggcctaccctcgccgaggcaatgtcgatg
aagaaggttcccaacatgcaaatcgcctcctacatggccgtcaccatcgttgcggccaag
ggcagcttcgacgacgcaaccctctcggctttcatggagcagatcgttcacggctggacc
agcgagactgtgcgccccgggcttgtctgcttgtgcattctggcgcagtaccgctcggcg
aagcaactttccggaaaggtcaccaaggctttgttgaaggtccagaacctcggcgagata
ctggtcgagctgggccaggagaggagggtcgacaagctcaccaacggactatgcattgcc
ttcatcgaacgcttgtgcaagaagggcgacgctcgcggcctgccgattatccgcgccatc
ttgatgagcaagatcttgaaggagaagcagattgctgtcattttcaagtccctggtgctg
gctgcgcacagactcgacgacgaggttgacaaggacggcgaaatccgcaaggagcttggc
tccacgttgatcgacctgtctcgcttctcgggcgagacgagcgagatcatccgtaccgtc
ttggaggaagtcgactttgacgtcgaggagttggaaatgaagcttgacgtctccatccgc
caaagaaaggccctgccgggctctcaggaggacgtcgaaatgaccgaatccaagacccct
gctccttccaaggaggatctgagagagactatccgggaactctcgacccagaagcgcgcc
ctcccctcgtgtctttctaccaccaccggcgaggtttacgacgagttcagcagactcttc
cttcgcgtcgtctcccagcagtccgaggacccgacactgctcgctgatttcgaccagctg
ccatctctgagccgccaaactgcagtcagcgaccacacatacatcaccttctttgtccgc
atctggtcgggtccttacccgactctcgctcgcgctgccgccgtagatgctgtcaggaga
cgtctgagcgacggtgacggcaacgacctcgacttccaggctctgatcccctactgtctt
gtggctctcgttgattcctccaagaaggtgcgccgtgctgctgccgagctactgatccag
attggtcatttcttcccccctcagtcaaaggccgcgaagaagtctgtctggggcggtaag
aacctatacgacgacagtgccaaggtgcaatggctggaggccgacactgtctcccgcctg
ttgcacggcgtaattcttcccgctctggaggaatgcatcatgcacgaagaccacattcgc
gcagtgctgcactctaccctcgacagcagcgccaagaacgagggcagcgacggaaagaag
gcgctcagctcagcaggcagatcgtcggtcttgtcattcttagccagccacgttgttgcg
acaccgctgctccgggtcaagtccaaccttctctctgtcctcaaccgcatcagaggagtg
tcgtccacctcgaggacgaaggtactgctgccggcgttccagtggtgggcttccttgtct
gcggaagagacgaaccgtctctccgaggtcgaggaagtggaccaggctgtgcttcacacc
agattcgccgagatcgttgtgcccaacgacagcgaggggctggattgcctcctctcgatc
atcaaggactctgcctccgccaagcgtccggagctggtccggtccatctctgcgcgcatc
cgcgccatctggagttcgatgaaggccgataccaagttcgacgtggctcagacaatgctg
gaactctctcaggcgcggcacgcatcccaggacgaggaggacatcattgccgatgaggct
gccgatttcctgaggaacgtcgagctgaccacagagatcctcgcctacttcctcgagtcc
atccagaccggtacaaagctcatcaccgagccgccggcaaacaagcgacgcaggaccagc
tcgtctgaggcgaaccgcgcagtcaccgcgcaggccagtgctgagctgagtgcgacgttg
agatcggtcacgtttgtgctccagctggtggatggttccaaccctgctgcccacccggag
ctcctcgacagtctattcggcaccctctcggagctgcagcacttccgcaccgtcattgga
tccgagcttggctacctgcaaaacctggtgctgacaagcttgatcgcgatggtccccgcc
tataggaacaacaagagcctgaagattgacggctctggaggccacggcgacctgctcgtc
aattgcatccagaagtcttccagcccgattgtgcaaaactcggccttgcttctgattgcc
agcctcgcctctgccgccccggatctcgtgcttcatagcgtcatgcccatcttcactttc
atgggcgcctccgttctccgccagaacgacgaccactctgcgcatgtggtgaaccagacc
atcaaggaggtcgtcccgcctttgatggcgtcgctcaagaagggcaagcgaaacccggtc
gccggtgccaccgagttgcttgccagcttcgtcaccgcgtacgagcacatccccgcacac
cgcaagcagggcttgttcgttgctctcatcaacaccctgggtcccgatgagttcctgtac
gccctgttggcgatgctggtcgatagatacggccccaacgacagcctgatggcgtttgcc
tctgaactcctcggcttttacagcgctgaggtgcagctccagaccttggccaggctcctt
gacttgatcagtgacatcttcaagcccaagcccggtctttcggccactctgctgggcgtc
ggcgaggacttggcggagaagaagcccgagaccactgccctgcagcagctgactgtcttc
ccctctctcctttccagcaggaagctccggaaggagatcaccgtccttacagagagggac
gatatggactcatccaagatccgggacctgtacgccattcttctcagggatgtcctggcc
ctcgccgagaccgtcaagaatcagaaggcgttacacgagtgctgcggcaatgccctggcc
aacctgctcaacctactgtctattggcgagttcatcaagtcggtcgagaacctgttggac
cataccgaaatcgatctccgccgcaaggttctgcgggcactcgaggttcgcgtggaccag
gagggcgtcgcagatgttgcctcgaggacggcgctgctcgctttcctgccgcagctgaca
gccgcgatccgggacacggacgacatcaagtacaagcacaccgctgttgcctgcatcgac
aagattgcggagaagtacggcaagaaggatgtcgaggccgtggcaggcgccgcggcgacc
atcgccgggcctcactgcctcggccagcccgacacccgcttgcgcgtcatggccctgctc
tgccttgcctctctcgttgatgtcctgcaagatggcatcctgcctatcgtcaatattgcc
atttcccaggcgattctctatatcgaacagagcgtggaggaggagaaggccgcgaacgag
ctgcacaacgccggctacgcgttcatcaccgccctggcgcagcacctgccttacatgatc
tccgcgaagcacctggacaacatcttcctcgcttccaacaagtccgctgaggccaacctg
gacaacgaggccgacgacgagcgcctcaactgcctgagattccttgctaggaaggtcgaa
gccaagaccctgctggccagtctggagaggaactggattccggccactgagactggtttc
gacgcaactgacgaatgggttgacatctttggcgttgtggtcgagagtcacaccaagtcc
gtcgtcacaaagaacgttactgccctgtcgacgattctcctcaactcgctggacctccgg
agacgcgagcacgcaaaggagaagcttggcaacacggcgtctcagcgcgtgtccaagatc
gaggcgtcaatcaacgaagtcgccctcaagatgatctacaagctcaatgatgcggctttc
cggcccatctttacgcacatcgtcgagtggtccacgcagctccccaagcaagatgtcgcc
ggacgcgcgctgcgccgtttcagcgtctacgggttcttgcagatgttcttcgagagcctc
aaatcgatcgtcaccaactacgcaacctacattgtggacgacgccgtcgaaatcatcaag
acgtgcgacttcaagctgccggagcagaaggagctgtggcggcgcgtcctgtcgactctg
gcaaggtgctttgagcacgaccaggacgatttctggcaagcgcccgcgcatttcagcaag
gccgcgccggttctcaccgcgcagttcctcaacgcctcttccgttgacctgtcggccgag
ctaatccccgccgtcgtcgaattggcgtctgcggcagactcccaggagcaccaaaaggag
ctcaacagcacgatcctccgccacctgcggtctgagcaggcgtcggtacgtctggcggcc
gtcaagtgccagcaggagctcgccgagaagcttggcgaggaatggctgtcggcgctgcct
gagatgttgccttacatcagcgagctccaggacgacgacgacgaggtggtcgagcgcgag
acgcaccggtggatcgtcaagatcgagggtgtccttggcgaaagcctggactccatgttg
cagtaa
DBGET
integrated database retrieval system
