Colletotrichum higginsianum: CH63R_02904
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Entry
CH63R_02904 CDS
T08176
Name
(RefSeq) SNF2 super family protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_02904
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_02904
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CH63R_02904
RSC complex
CH63R_02904
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CH63R_02904
SWI/SNF complex
CH63R_02904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
DEAD
HDA2-3
RBR
Motif
Other DBs
NCBI-GeneID:
28861986
NCBI-ProteinID:
XP_018162695
UniProt:
H1V1I7
LinkDB
All DBs
Position
2:complement(3985140..3989658)
Genome browser
AA seq
1452 aa
AA seq
DB search
MASVQAAPAVQLPGAGMTATTPQQAQEIFNKFKQMRENGVPTTDPEYIKAEQFVLSFQQQ
ARLRQKQQAFLQHQQQQQQMQQQRQMQQAGGPNGAVNGAHPAQQQQQSTQPSASSALGGS
ALPSASSNTSVAAAGSPTTSAPSSGPGAGQFNPQQLSLLRQQIHAFKLLTKNAGVPLQMQ
QAIFTQRERRKAIAAEAAAMAASSTPAPVSRDSAQPGPNGVESKSEPPEVQGPTFKAVKS
PYDDPNLIRKSISYFEHTQRRNRKLIPGLFPTGVDFDQLRYEREVIIFNRMRDRYAELKS
TPANIAHWDTTADDVELDDSARVKAIIEMKGLGLYAKQRAMRDKIGRSMMFYDNLAMTTN
RSNYRRTKKMTVREARITEKLEKQQRDIRENREKKRHTDFLAAITQHRNEIQQTAASQRN
KSSKLNKLMFAQHYNIEKEEQKRIERTAKQRLQALKANDEEAYLKLLDEAKDTRITHLLR
QTDGFLRQLAASVKSQQRKALLEQTGEEQMPEEEEESEHESDADDTSGRKIDYYAVAHKI
KEEVTEQANMLVGGRLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIE
RKKQEGPYLVIVPLSTLTNWTLEFEKWAPSVSKIVYKGPPLARKQQQDKIRQGRFQVLLT
TYEYIIKDRPVLSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRFRLILTGTPLQNNL
TELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQILVIRRLHKVLRPFL
LRRLKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHNKILVSDGQGGKAGARGLSNMI
MQLRKLCNHPFVFDEVENTMNPMSISNDLLWRTAGKFELLDRVLPKYKATGHRVLMFFQM
TAIMDIMEDYLRYRNMKYLRLDGTTKSDERSDLLREFNAPNSDYFMFLLSTRAGGLGLNL
QTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARYKLDMD
GKVIQAGRFDNKSTETDRDAMLRTLLESADLAETGEQDEMDDEELNLLLARSDDEVTVFQ
KLDEERRKDPIYGDAAGAKAKPRLLGEDELPDIYLGDGSLVEEEVETSLGRGARERTKVR
YDDGLTEEQWLMAVDDDDDSPEAAAARKQARKDKRENNRLKRTAVMNAADASPSVSRAST
EEVETPKKRGRKPGSKNQEKRKADDGEDEPPAKKRRGPQGRPKAVSVSAGSEAPRISAQQ
RQSLQTSARALFDGLMNLEVDDPEPPEEDDDESVAGKRIIIGPFLALPPKRDYADYYLII
QAPISMKQIEQKIKKQQYYSLGDMRKDVDLMFSNCQTYNEEASLLYQDSLTLQKFFHEQL
QKELEEHPELQELEGDGPKEASVAPSASASVGTPQPVTSATRIKLISSASNGAKEANGES
NGGSNGAPSDQE
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgttcaggctgcccctgctgtccagctccctggcgccggcatgaccgccacc
actcctcaacaggctcaagagatattcaacaaatttaagcagatgagagaaaatggcgtc
cccaccaccgaccccgaatatatcaaggccgagcagttcgttctgtctttccaacaacaa
gcgcgtctacgacagaaacaacaagctttcctccaacaccagcagcaacagcagcagatg
caacagcagcgacagatgcagcaggctggtggccccaatggcgctgtcaacggcgcgcat
cccgctcagcagcagcaacagtcaacacaaccatctgcgtccagtgcgcttggcggctct
gcccttccctctgcaagctcaaatacctcggtcgccgccgccggctcgccaaccacatcg
gctccgtcaagcggtcctggcgctggtcaattcaaccctcagcaactgagtctgcttcgc
caacaaatccatgcattcaagttgctgacaaagaatgctggcgttcctttgcagatgcag
caggccatcttcacccaacgcgagcggaggaaagccatcgccgccgaggccgccgcgatg
gcggcttcatcaacaccggcacccgtttctcgcgactccgcacagcctggtccgaatggc
gtcgagtccaagtctgaacctcccgaggttcagggcccaacgttcaaggctgtcaagtct
ccttacgacgaccccaacctgatccgcaagtccatcagctacttcgaacacacccagcgc
aggaaccgcaagctaattcctggacttttccctaccggtgtggactttgaccagctgcgc
tacgagcgagaagtcattatcttcaaccgcatgcgtgaccgttacgccgagctgaagagc
acgccggcaaacatcgctcactgggacaccaccgcggacgatgtcgaactggacgacagc
gccagggtcaaggccatcattgagatgaagggtctggggctgtacgccaagcagagggca
atgcgcgacaagattggccgctcgatgatgttttacgacaacctcgctatgaccaccaac
cgttccaactaccgccgcaccaagaagatgacggttcgcgaggctagaatcaccgagaag
cttgagaagcagcagcgcgatatccgtgagaaccgtgagaagaagaggcacaccgacttc
ctcgcggccatcacccaacaccggaacgagatccagcagactgccgcaagccagcgtaat
aagtcgagcaagcttaacaagctcatgttcgcccagcactacaatattgaaaaggaagag
cagaagagaatcgagcgcaccgccaagcagcgtctgcaagccctcaaggccaacgacgaa
gaggcatatctcaagctgctcgacgaagccaaggacacccgtatcacccaccttctgcga
cagaccgacgggttcttacgccagctcgccgcctctgtcaagtctcagcaaaggaaggct
ctattggaacaaactggcgaggaacagatgccagaggaagaggaggagagcgagcacgag
agcgacgcagacgacacgagcggaaggaagattgactactatgccgttgcccacaagatc
aaggaggaggtcaccgagcaggccaacatgctcgtgggtggcaggctcaaagaataccag
gtcaagggtctgcaatggatgatctcactgtacaacaacaatctcaacggtattcttgca
gacgagatgggtctcggcaagaccatccagaccatcagtctggtcacgtacctcatcgag
cgcaagaagcaggaaggaccttatctggtcatcgtgccactcagcactttgaccaactgg
acccttgaattcgagaagtgggccccgtccgtcagcaagatcgtctacaagggacctcct
ctggccagaaagcaacagcaggacaagattcgccagggacgcttccaagttctgctcacg
acatacgagtacatcatcaaggaccggccggttcttagcaagatcaagtggttccacatg
attatcgacgaaggtcaccgtatgaagaaccagaactccaagcttacgtccaccatccaa
caatactaccacacccgattccgcctgattttgacgggtaccccgctgcagaataacctt
actgagctgtgggccatgctcaatttcaccctccccactattttcaaatccgccaagact
ttcgacgagtggttcaacacgccctttgccaacacgggtggacaggacaagatggacctc
acggaagaagagcagattctcgtcattcgtcgcctgcacaaggtgctgcgacccttcctg
ctgcgtcgtctgaagaaggatgtcgaaaaggacctcccggacaagacagaaaaggtcatc
aagtgcaagttctcggccctgcagagcaagctgtacaagcagatggtcacgcacaacaag
atcctcgtcagcgacggacagggtggcaaggctggtgctcgtggtctgagcaacatgatc
atgcagcttcgcaagctctgcaaccaccccttcgtctttgacgaagtcgagaacaccatg
aaccccatgagcatcagcaacgacttgctctggagaacggccggcaagttcgagctcttg
gaccgggttttgcccaagtacaaggctacgggccatcgcgtcctgatgttctttcagatg
acggcgatcatggacattatggaagattacctgagataccgcaacatgaagtacctccgt
ctggacggtacgaccaagtcagacgagcgttccgatctgttgcgcgagttcaatgctccg
aactcggattacttcatgttcttgctgtcgacacgtgccggtggtcttggtctgaatttg
cagactgccgacaccgtcattatctacgattctgactggaaccctcatcaagatttacag
gcccaggatcgtgcccatcgtatcgggcaaaagaacgaggttcgcatcctgcgtctcatc
agttccaactcggtcgaagagaagatcttggaaagagccaggtacaagctcgacatggac
ggcaaggtcatccaggccggtcgtttcgataacaaatcgacggaaacagatcgtgacgcc
atgttgcgaacccttttggagagtgccgaccttgcagaaacgggagagcaggatgaaatg
gacgatgaggagttgaacctgctcctcgctcgtagcgacgacgaggtgactgtcttccag
aagctcgacgaggagcggaggaaggacccaatctacggcgatgcggccggcgcgaaggcc
aagccccgtctgttgggagaggacgaactccccgacatctatctgggcgacggcagcctg
gtggaagaggaggtggagacgagtcttggacgcggagcccgtgagcggaccaaggttcgc
tacgacgacggcctcacggaggagcagtggctcatggctgtcgatgacgacgacgattct
cccgaggctgctgctgcgcgcaagcaagcacgtaaggacaagagggagaacaaccggctc
aagaggacagccgtgatgaacgccgcggatgcctccccctcggtaagtcgcgccagcacc
gaggaagtggaaacgcccaaaaagaggggtcgcaagcccggcagcaagaaccaggagaag
cgcaaggcagacgatggcgaggatgagccgccagccaagaagcgtcgcggaccccaaggc
agacccaaggcggtctccgtgtcggcggggtctgaagcgccacgaatctcggcccagcag
cgccagtccctccagacaagcgcgcgtgccctgtttgacggactcatgaaccttgaggtc
gacgatccggagccccctgaggaggatgacgacgagtcggtggcaggcaagcggatcatt
atcggaccgttccttgctttgcctcccaagcgcgactacgccgactactacttgatcatt
caagcccccatctcgatgaagcagatcgagcaaaagattaagaagcagcaatattatagc
ctcggcgacatgcgcaaggatgtcgatctcatgttcagcaactgccaaacgtacaacgag
gaggcatcacttctgtaccaggattccctgactttacagaaattctttcacgagcagctc
cagaaggaactcgaggagcacccggagttgcaagagcttgagggcgatggccccaaagag
gcgtctgtggcacccagcgccagtgcgagcgtcggaacccctcaaccggtaacgtcggcc
acgagaatcaagctgatctcttcggcttccaacggcgccaaagaagcgaacggcgaaagc
aacggaggcagcaacggtgctccgagcgaccaggagtag
DBGET
integrated database retrieval system