Colletotrichum higginsianum: CH63R_02925
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Entry
CH63R_02925 CDS
T08176
Name
(RefSeq) SNF2 family domain-containing protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_02925
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CH63R_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
TPR_Trm732_C
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
28862007
NCBI-ProteinID:
XP_018162716
UniProt:
A0A1B7YQ75
LinkDB
All DBs
Position
2:complement(4051262..4057219)
Genome browser
AA seq
1888 aa
AA seq
DB search
MASRILETGSTRLIRDTAVNQLADWQKQHPDELFNLLSRVVPYLRHKDWETRSTSAKAIG
KIIENAPLYDPNEDEDVAPVKKDEPEENGHVKKEEEEKEATSFSSDELLKLETLNVEHIV
KYGRQLLRGGNIEYALASLDPPARLAHQKKTLNGRLGLLGRVFEDAEMPVLVEKDPSPHT
PQDSTNGHNGSKESATPHSQNQPAEEAGLSSRQLNVLKRKRKRELQKAAQGKGGFGDLTV
RRTTTAGSEGFDETPMPDADSKQKNGKVNDYFNLDRPTDVDEESKVVSEFKGQVIPIKSE
IEVDETMEGAEWPYDRLCDFLKVDLFDPSWETRHGAAMGIREVIRVHGGGAGRIRSKTRA
ENDRLNQAWLDDLACRLCCVLMLDRFTDYSSDTSVAPIRETIGQSLGSVLRHIPAESVHG
IYRILYGMVMQDDLQLEMLQWSVCHGGMVGLRYVVAVRKDLLLEDNEMIDGVIRLVMKGL
EEHDDDVRSVSAATLLPMAKEFVTLRPGSIDGLINIMWGSLADLGDDLSASTGKIMDLLA
TLCSYPEVLQAMETSAAQDEERSFTLLVPRLYPFLRHTITSVRLAVLKALMTFANLGAEN
SRGWLNGRILRLIFQNILVERDRETLAMSLDVWAALVRSLSKTPEVLADEFAAHVEPLMI
LTLHPIGVSRHPLPMPAHLFQKPSGGTYAPATATPARKASSPEGPERATKRRRKSAKTDD
APVTSHTHDVDGHMIQGDVDLVGMDTLIRSRVSAAKAMGLLMSFIPSSSLSEYDQLLLAG
LSDRASSTQLTACMVIDEYAKNGPATEGAQRFAAPLQKIIETERPGHYSDLVSYMHRVRS
QCQQLLNMFRDHGKVSSGRLPTLAVLVQGDEQAGPGAFSIAVADKVVGEDFDKLKKVMSP
GQRLVASQMLGEAREVTVSAISDAKAAKDSRDVRIKAGAACALVAIKALPKKPSPLIKGI
MDSIKMEENQELQIRASATIARLVQLFNEMGRRGPADKVVSNLIKFSCVEVAETPEFPVH
ASKTDCVLSMQKEEDRVDHADAAKWAKEAKAARITRRGAKEALEILAQTYGADLLTAVPT
IRVFMEDPLVKAFSGPLPAEAKDPENTFGQEIVDALSLIRTLMPTLDKAMHPFIMEKVPL
IIKALHSELSVFRYMAAKCIATICSVITVEGMTALVENVLPSISNPVDLNFRQGAIEAIY
HLIAVMGDSILPYVIFLIVPVLGRMSDSDNEIRLIATTSFATLVKLVPLEAGIPDPPGLS
EELLKGRDRERTFISQLLDPKKVESFQIPVAIKAELRSYQQEGVNWLHFLNKYHLHGILC
DDMGLGKTLQTICMVASDHHQRAEEFEKTGAPDVRRLPSLVVCPPTLSGHWQQEIKTYAP
FLSVTAYVGPPAERKSMKDSLDKTDIVVTSYDVCRNDADVLAKYNWNYVILDEGHLIKNP
KAKITIAVKKLASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAAS
RFSKASSKEQEAGALAIEALHKQVLPFLLRRLKEEVLDDLPPKILQNYYCDLSDLQKKLF
DDFTRKQGKKLQEEAGREDKDAKSHIFQALQYMRKLCNSPAMVMKPGHGMYDETQRILSK
QGTSLEDPVHAPKLTALRDLLVDCGIGVEEAESNDPLYQPIKPHRALVFCQMKEMLDMVQ
NTVLKSMLPGVTYLRLDGGVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLTGADTV
IFVEHDWNPQKDMQAMDRAHRIGQKKVVNVYRLVTRGTLEEKILSLQRFKIDVASTVVNQ
QNAGLATMDTDQILDLFNLGDTGPSLISDKPQNAMEGREEDMVDIETGDVVTSKQPGKKA
WLDDLGDLWDNRQYEESFDLDGFLKTMQ
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaggattctcgaaacgggcagtacccgtctcattcgtgacaccgcagtcaac
caacttgccgactggcaaaagcagcatcccgacgaactcttcaaccttctttccagagtc
gtcccttatcttcgacacaaagactgggagacacgttctacgtcggccaaagcgataggg
aaaatcattgagaatgcgccgttatacgacccgaatgaggatgaggacgttgcgccagtc
aagaaggacgagcccgaggagaacggccacgtgaagaaggaagaagaagaaaaggaagcg
acgtccttctcttcagacgagcttctcaagctggagacgctgaatgtagagcacattgtc
aagtatggccggcagcttctgaggggcggcaatatcgagtatgctttggcctcattagac
cctcctgcacgccttgcccaccagaagaagacactcaacggacgactcggtcttctcggc
agggtgtttgaggacgccgagatgcccgtccttgtcgagaaggatcccagcccgcacact
ccccaggactcgacaaatggtcacaacggaagcaaagagagcgccactcctcatagccag
aaccagccagcagaggaggcgggcttgagctcgagacaactgaatgttctcaagcggaaa
cggaagagagagctgcaaaaggcggcgcagggaaagggcggattcggagatctgaccgtg
agaagaaccacaacggcaggctccgaaggatttgacgagacgccgatgccggatgcagac
tcgaagcagaagaacggaaaagtgaatgactacttcaacctggacaggccgacagatgtc
gacgaagagtccaaggttgtcagcgaattcaagggacaggtgataccgatcaagtccgaa
atcgaggtggacgaaaccatggagggcgccgaatggccgtacgaccgactctgcgatttc
ctcaaggtcgacctcttcgacccctcctgggagactcggcatggagctgcgatgggcatt
cgcgaggttatccgtgtccacggaggtggggctggaagaatacgctctaagaccagggcg
gaaaacgatcggttgaatcaagcctggctagacgacctggcctgccgactctgctgcgtc
ctgatgttggaccgatttaccgattacagttccgacacgtccgtcgccccgattcgtgaa
actatcggccaatctctcggttcggtgctgcgacacatccctgccgaatccgtccacggc
atttacaggattctctatggcatggttatgcaggacgatctgcaactcgagatgcttcag
tggtcggtctgtcacggcggcatggtcggcctcagatatgtcgttgccgtacggaaggac
ctgctcctcgaggacaacgagatgatcgacggggttattcgcctagtcatgaaggggctg
gaagaacacgacgacgacgtcaggtccgtgagtgccgcgacactgctgcccatggcgaag
gagttcgttaccttgcgacccggatccatcgatggccttatcaacatcatgtggggaagt
ctcgccgatctgggagatgacctgagcgccagtaccggcaagatcatggacctccttgca
acgctctgcagctatcccgaggttcttcaggccatggaaacgtccgctgcgcaagacgaa
gagcgctctttcaccctgctggtaccgcgtctttatcccttccttcgacacaccattacc
tctgttcgcctagccgtcctgaaggctctcatgacttttgccaacctcggcgccgagaac
tcgcgaggatggctcaatggaaggattctgcgcctcattttccagaacatccttgtcgag
cgagatagggaaacgctggccatgtccctggacgtctgggcggccttggttcgctccctt
tccaagacccccgaggtcttggcggatgagttcgccgctcacgtcgagcctttgatgata
ctcacactgcacccaatcggtgtgtcacggcatcccttgcccatgcctgcccatcttttc
cagaagccctcaggcggtacatacgcgccagccaccgcgacgcccgcacgaaaggcgtct
tcccccgagggtcccgaaagagcgactaagcgccgacgtaaatctgcgaagacggatgac
gcccctgttacctcgcatacccacgacgttgatggtcacatgattcaaggagacgttgac
ctggtcggcatggatactctgatccgatcgcgtgtttcagcagccaaggcaatgggcttg
ctcatgtccttcatcccgtcctcgagcctctccgagtatgatcagcttctcctcgctggt
ctctcggacagggcgtcctcgacgcagctcacagcctgcatggttattgacgagtatgcc
aagaatggaccggcaacggagggtgcgcaaagattcgcggcgcccctgcaaaaaatcatc
gaaacggaacgtcctggtcattacagcgacctggtgagctacatgcacagggtgcggtcg
caatgccagcagctcctgaacatgttccgcgaccacggcaaggtatcgagcggacggctt
ccgacccttgccgtccttgtccagggcgacgagcaagcaggccccggcgccttctctatc
gccgtcgcggacaaggtcgttggcgaagatttcgacaagctaaagaaggtcatgtcgcca
ggacagcgtttggttgctagccaaatgcttggcgaagccagagaggtgactgtctcggcc
atctccgacgcaaaggcggccaaggattctcgagatgtgcgcatcaaggccggcgcggct
tgcgcgctggtcgcaatcaaggcgttgcctaaaaagcccagcccgctgattaaaggcatc
atggacagcatcaagatggaggagaaccaggagcttcaaatccgggcatcggctaccatc
gccagacttgtccagctgttcaacgagatgggccgccgtggaccagcagacaaggtcgtt
tccaacctgatcaagttctcttgcgtcgaggtcgctgagaccccagagttccctgttcac
gcaagcaagacggactgcgtgctttcgatgcagaaggaagaggatcgtgtggaccacgca
gacgccgccaagtgggcaaaggaagccaaggcagcccgaatcacccgccgtggcgccaag
gaggccttggagatactggcccagacatatggcgcggatctcctcactgcggtacccacg
atcagagtctttatggaggaccctctcgttaaggcgttctccggccccctaccggcagag
gcaaaggaccccgagaacacattcggacaagaaatagtcgacgccttgtccctcatccgg
acgctcatgccaactctcgacaaggccatgcatccgttcatcatggagaaggtgcccttg
attatcaaggccttacattccgagttgtccgtcttccgctacatggccgccaagtgtata
gccaccatttgcagcgtcatcacagtcgagggcatgacggcgcttgttgagaacgttttg
ccgtccattagcaaccctgttgacctcaacttccgccaaggtgccatcgaggccatctac
cacttgattgcagtcatgggcgattccatacttccttacgtcatcttcctcatcgttccc
gttttgggccgcatgagcgactccgataacgagattcgtcttattgcgacaacctccttc
gccactctcgtcaagctcgtgccccttgaggccggcattcccgatcccccaggtctgtct
gaagagttgctcaagggcagagatcgcgaaagaaccttcatttcgcagctcttggacccg
aagaaggtggaatcgttccagatcccggttgccatcaaggcagaacttcgctcataccag
caagaaggtgtcaactggctacacttcctcaacaaatatcacttgcacggaattctttgc
gacgacatgggtcttggcaagactttgcaaaccatttgcatggttgctagcgaccatcat
cagcgtgcggaagagttcgaaaagacaggggcgcccgatgtccgacgtctcccatccctg
gttgtttgtcctcctacgctgtccggccactggcagcaggaaatcaagacttacgctccc
ttcctcagcgtgaccgcttacgtcggcccgcctgcggagagaaaatctatgaaggacagc
ctggacaagaccgatatcgtcgtcaccagctatgatgtctgccgaaatgacgcggacgtg
ctcgccaagtacaactggaactatgtcattctagacgaggggcatttgatcaagaatccc
aaggcaaagattacgattgctgtcaagaaactggcaagtaaccaccggttgatcttgacg
ggcacgcccatccagaataacgttttggaactctggtctctcttcgactttttgatgcct
ggtttcctcggtgccgaaaaggttttcctggacagatttgccaagcccatcgccgcaagt
cgcttcagcaaggcgtcttcaaaagaacaggaagctggagctctggctattgaagcactc
cacaagcaggttctccctttcctgctgagacgtctcaaggaggaggttctcgatgacctg
ccacccaagatcttgcagaactactattgcgatttgagcgatctccagaagaagctattc
gatgacttcactcggaagcaaggcaagaagctgcaagaagaggccggtcgcgaagacaag
gacgccaaatcacacatcttccaggccctgcagtatatgcggaagctctgcaattccccc
gccatggtcatgaaacctggtcacggcatgtacgacgaaacgcaacgcatcctcagcaag
cagggaaccagccttgaggatcccgttcacgcgcccaagctgaccgctctgagagacctg
ctcgtcgactgcggcattggcgtggaagaggccgagtcaaacgacccactgtaccagccg
atcaagccgcatcgcgctcttgtcttctgtcagatgaaggagatgctggacatggttcag
aacacggttctgaagagcatgctgccaggcgtcacttatcttcgtctggacggtggcgtt
gaagccaacaagagacaagacattgtcaacaagttcaacagcgatccatcgtacgatgtg
ttactcttgaccacaagcgtaggaggtctgggtctcaacctgacaggtgccgacacagtc
atctttgtcgaacatgactggaacccccagaaggatatgcaggccatggaccgagctcac
cgaatcggccaaaagaaggttgtcaacgtataccgcctggttaccagaggcacgttggaa
gagaagattctcagtctacagcgcttcaagatcgacgttgcctcaacagtcgtcaatcag
caaaacgccggcttggccacaatggacacagatcagattctagacctcttcaatctggga
gacacaggacccagtctcatatcggacaagccgcagaacgcaatggagggcagagaggaa
gacatggtggacattgaaacgggcgacgttgttactagcaagcagcctggcaagaaggca
tggcttgacgacttgggtgatctctgggacaaccgccagtacgaggagagtttcgacctg
gatggtttcttgaagacgatgcagtaa
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