Colletotrichum higginsianum: CH63R_02955
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Entry
CH63R_02955 CDS
T08176
Name
(RefSeq) RNA polymerase ii-paf1
KO
K15174
RNA polymerase II-associated factor 1
Organism
chig
Colletotrichum higginsianum
Pathway
chig04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
CH63R_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_02955
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CH63R_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
28862037
NCBI-ProteinID:
XP_018162746
UniProt:
H1VSP6
LinkDB
All DBs
Position
2:complement(4175389..4176859)
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AA seq
469 aa
AA seq
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MSSSAPRGGERMIHQDFIARIRYSNALPPPPNPPKLLDIPNTGLASGQYTTPGFASRLAR
EQPLNIEVDAELGMPLNLVGMPGIFDGDESSIQASSHPPPVHPHDRALLRPLSTLGRAKS
NADASVSFLRRTEYISSVAPRKAGVAAGAFINPKIKRAEKRRSPEPDKDSPAAIRRKIEK
SFESAERFLSNPSRHRHPSKPNVHLTSSYPLLPDPDAFPDSGAYVTVKLLTNPVASANKY
DRRLLSGLLRPLDRSPEENEAFQAALEAHERDPVRNPKPANLMDYSFFLPKTQATGDNFR
AKFDPENPDHDDDSLYTYQSGSNPCFQFSRLRAYETTKETELDHNSKYSEEVILAFNDEP
SGGKQKAAYYYPVIQRTTIRPQRAKNIARTLTQTDDETQVVNEVEVSITDPKGAPRENMK
RYKERPIGYVEEVQDPFPPVEGGGEGAAPGTPSDRDADGDADGDEEDED
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcggcgcctcgcggcggcgagcgcatgatccatcaggatttcatcgctcga
atccgttactccaacgcccttccgcctcctcccaacccgcccaagctgctcgacatcccg
aacaccggcctggctagcggccagtacacaacgcccggcttcgcgtcgcgcctggcgaga
gagcaaccgctgaacattgaggtcgatgcggagctcggcatgcccttgaacctcgtgggc
atgccgggtatctttgatggagacgagagctctatccaggcctcttcgcacccacccccc
gtccacccccacgacagagcccttctcaggccgctctctaccctgggccgagccaagagc
aacgccgacgcatcagtctccttccttcgaagaaccgaatacatctcctccgtggcccct
aggaaagcgggtgtcgccgcgggagctttcatcaaccccaagatcaagcgcgccgagaag
cgccgctctcccgagccggacaaagactcgccagcagccatcaggcgcaagatcgagaag
agcttcgagagcgcggagcgcttcctcagcaacccgagccgccatcgtcaccccagcaag
cccaatgtccatctcacttcctcgtaccctctgctacccgatcccgacgcgttccccgac
tcgggtgcatacgtcaccgtcaagctcctcacaaaccccgtggccagcgccaacaagtac
gatcgccgcctgctcagcggtctgctgcgtcctctcgacaggagccccgaggaaaacgag
gccttccaagctgctctcgaggctcacgagcgggaccccgtgcgcaaccccaagcccgcc
aacctgatggactacagcttcttcctccccaagacccaggccacgggcgacaacttccgc
gccaagtttgacccggagaaccccgaccacgacgacgactcgctctacacataccagagc
gggtctaacccctgcttccagttctctcgtctgcgtgcgtacgagacgaccaaggagacg
gagctggatcacaactccaagtacagcgaggaggtcatccttgccttcaatgacgagcct
tcgggcggcaagcagaaggccgcctactactacccggtcatccagcgcaccaccattcgc
cctcagcgtgccaagaacattgcgcgcacattgacgcagacggacgatgagacgcaggtt
gtcaacgaggtcgaggtgtccatcaccgaccccaagggcgcgccgcgcgagaacatgaag
cgatacaaggaacggcccataggctatgtagaagaggtgcaggaccccttccctcccgtc
gagggcggcggcgaaggcgctgctcccgggacaccctcggaccgggatgccgatggcgat
gctgatggagatgaggaggatgaggattag
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