Colletotrichum higginsianum: CH63R_03891
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Entry
CH63R_03891 CDS
T08176
Name
(RefSeq) Type IIB DNA topoisomerase
KO
K10878
meiotic recombination protein SPO11
Organism
chig
Colletotrichum higginsianum
Pathway
chig04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09143 Cell growth and death
04113 Meiosis - yeast
CH63R_03891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_03891
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
CH63R_03891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
28862973
NCBI-ProteinID:
XP_018160112
UniProt:
A0A1B7YHW6
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All DBs
Position
3:1107222..1108819
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AA seq
452 aa
AA seq
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MDCAISTLLNGRQQGRLTSHQFSNPSQSSNVVTIPDADLGRNATGAAITKLEDILVSVQE
SLNRNEEMSIPYRCRPSSASQSASSSVSSRLPRSAVRFPGRTVHEATKFSASLDAHLADV
SRRPDSGQNHHQEVCSSHAPACLHRALLKARKRRSIYYQDEHLFKQQSIVDNLVDDLAYT
LGLGREDLGIVATSKGLVAGPILIRTKPQSDLDPIRGTPSELDASSSATVRSSRIAPFWR
GWLTILGEISQIDFGPVRWVLVIEKDATFRTLAARRYYDTSTCGSGILITGKGYPDLVTK
QFLHLIHDVKPELPILALVDYDYDGIAIMRCYSHGSRGHAHERNTVVPSMAWLGIKSGDL
APRQEEGSDGSQRPLGPNLFEHSSSITRKDRKSAARLISGIDEDGTDYDIDCRRELQVML
FLGAKAEIQAVDDAGDTSSWLDSHMKERLFTS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgctatatccacattgctcaacggccgccagcagggccgactaacgtcccac
cagttctctaacccgagtcaatcaagcaacgtcgtgaccatccctgatgcagaccttggt
aggaatgccacaggcgccgccatcaccaagttggaagacattctcgtttcggtccaggag
tctctgaatcggaacgaagagatgtctatcccctacaggtgccgcccatcgtcggccagt
caatccgccagcagctctgtcagctcccggctaccccgatctgcggttcgtttccctggc
cgaacggtccatgaagccaccaaattcagtgcctcgcttgatgcgcatcttgcagatgtc
tctcggcgccctgacagcgggcagaaccatcaccaagaggtctgtagcagccacgctcct
gcctgcttacaccgggctttgctaaaggcaaggaaacgcaggagcatctactatcaagat
gagcatctgttcaagcagcagagcattgtcgacaacctcgttgatgacctggcctacact
ctaggacttggccgcgaggacctgggcatcgttgccacgagtaaaggcttggtggcaggt
cccatcttgatccgcaccaagcctcaatctgacctcgacccaatccggggaacgccgtcc
gagctcgacgcgtcttcaagtgctacagtacggtcgtcgaggattgcaccgttctggcga
ggctggctgactatcttaggagaaatctctcagattgattttggtcccgtgcgatgggta
ctggtcatcgagaaagacgccaccttccgcacactggctgcgaggagatactacgacaca
tctacttgtggaagtggcattctaatcacgggtaaaggctatccggacctcgtcacgaag
cagtttcttcacctcatccacgacgtaaaaccggagctgccaatcttggcccttgtggat
tacgactatgacggcatcgccatcatgcgatgttacagccatggttcgcgagggcatgcg
catgaaagaaacacagtcgtccccagcatggcatggctcggtatcaagagcggcgacctc
gcgccccgtcaagaggagggctctgatggcagccagagaccgcttgggcccaacttgttc
gagcactcaagctccatcactaggaaagacagaaaatcggcagccaggttaatcagtgga
attgatgaggacggcactgattacgacattgattgcaggcgggagttacaagttatgttg
tttttgggcgccaaggcggaaattcaggctgtggacgacgcgggcgacacatcgagttgg
ctcgacagtcacatgaaggagcgtttattcacctcatag
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