Colletotrichum higginsianum: CH63R_04143
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Entry
CH63R_04143 CDS
T08176
Name
(RefSeq) WD repeat domain-containing protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_04143
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
Other 90S particles
CH63R_04143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Beta-prop_HPS5
WD40_like
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_SCAP
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
28863225
NCBI-ProteinID:
XP_018160364
UniProt:
H1VYL2
LinkDB
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Position
3:complement(1925338..1927152)
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AA seq
604 aa
AA seq
DB search
MSSFFTIPGANKKRKRTDAPAAPKKRIAASKTSGRAPPKSSVAAKGSSGGKGKKSSATAA
LASKKRNERDDDDESISGSDSDDEGIASAAEESDNGSSEDEDGVAGETAAERRLRLAERY
LENVKQQVDDVGFDAAEIDRDMINERLQEDVAESKGKVYRALVDDLAFDRATSSFFRNNT
ETFTSVAVNAPYAYTTTKDMYLHKWRIQDLPQHQFPQTTKKKPKKPPAPPRKKPELENWL
RGNLHNATKKTFQRHVEKILCVAASPDGKYVVTGGEDRRLIIYDAETLKPIRVFTHHRDA
VTGLAFRRGTNQLYSCSKDRTVKVWSLDELAYIETLFGHQDEIVDIDALAQERCVSVGAR
DRTARLWKVAEETQLVFRGGAVDKKSRPDVDPRSLPHEGSMDRVAMIDDELFVTGSDNGS
LALWSVTKKKPLHIFPMAHGLEQPLRPDEASADHNPDPKIVPPPQPRWITALKTIPYSDV
ILSGSWDGCIRVWRLSEDKRKIEVAGVLTSEAEQAASKAAKGKSEDAAGGLKGVINDIAI
FERGDRGQDGICVVAAVGKEHRLGRWQMRKGKGKNGGYVFEVPKVLKKPEVNGNNNDASN
SESE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttcttcacaatccccggcgccaataagaagaggaagaggacagacgcccct
gcggctcccaagaagcgaattgccgcctccaaaacctccggcagagcccctccgaaatcg
tctgtagccgccaaaggcagcagcggcggaaaaggcaagaaatcctcagcaacggcagca
cttgcctccaagaagcgaaatgagcgcgacgatgacgacgaatcgatctcgggcagcgac
tcggacgacgaaggcatagcctccgccgcggaggagagcgacaatggctcatcggaggac
gaggatggtgtcgcgggcgagacggccgccgagcgccgcctgcggctggcggagcggtat
ctcgagaacgtcaagcagcaggtggatgatgtgggctttgacgccgccgagatcgaccgt
gacatgatcaacgagcggttacaagaggacgtggccgagtccaagggaaaagtctaccgc
gccctcgtcgacgacctcgccttcgaccgcgcgacctcgtctttcttccgcaacaatacc
gagaccttcacctccgtcgccgtcaacgccccctacgcctacaccaccaccaaggacatg
tacctgcacaagtggaggatacaggacctcccgcaacaccagttcccccagacgacgaag
aagaagcccaagaagccacccgcgccgccgcgcaagaagcccgagctagagaactggctg
aggggcaatctgcacaacgcgacaaaaaagacgtttcagcgtcacgttgagaagattctg
tgcgttgccgcgtcgccggacggcaagtacgtcgtcacgggcggtgaggaccgcaggctc
atcatctacgacgccgagaccctcaagcccatccgcgtcttcacccaccaccgcgatgct
gtcaccggcctcgcctttcgccgcggcacgaaccagctctactcttgctcaaaggaccga
acggtcaaagtatggagcttggacgagctggcctacatcgagaccctgttcggtcatcag
gacgagattgtcgacatcgacgctcttgctcaggagcgctgcgtcagtgtaggcgcccgc
gaccggacagcacgtctgtggaaggtcgccgaggagacacagctcgtcttccgtggaggc
gccgtggacaagaagtctcgcccagacgtcgacccgcgctcgctgccacacgagggcagc
atggaccgtgtcgccatgatcgatgacgagctcttcgtcacgggtagcgacaacggctcc
ctcgccctctggagcgtcacgaaaaagaaacctctccacatttttcctatggcccacggc
ctggaacaacccctccgcccggatgaggcttcggcggaccataacccagacccgaagatt
gtgcccccgccgcaaccgcggtggatcacggcgcttaagacgatcccctactcggacgtc
atccttagcggaagctgggatggctgcataagggtatggcgtctaagcgaggacaagcga
aagattgaagtagcgggtgttctcacatcggaggccgagcaggcggcttcgaaagccgcc
aaggggaagtcagaagatgccgcaggcggcttgaagggagtgattaacgacattgccatc
ttcgaacgtggtgatcgcggccaagatggcatctgcgtcgtggcggccgtgggcaaggag
cacaggcttggcagatggcagatgcgcaagggtaaagggaagaacggaggatacgttttt
gaggtgcccaaggtgttgaaaaagccggaagtgaacggcaacaataatgacgcatcgaat
tcggaaagcgagtaa
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