Colletotrichum higginsianum: CH63R_04144
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Entry
CH63R_04144 CDS
T08176
Name
(RefSeq) DEAD/DEAH box helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_04144
03041 Spliceosome [BR:
chig03041
]
CH63R_04144
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_04144
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH63R_04144
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CH63R_04144
mRNA cycle factors
Common to processing body (P body) and stress granule
CH63R_04144
Spliceosome [BR:
chig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CH63R_04144
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CH63R_04144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
28863226
NCBI-ProteinID:
XP_018160365
UniProt:
A0A1B7YJ25
LinkDB
All DBs
Position
3:1931694..1933865
Genome browser
AA seq
693 aa
AA seq
DB search
MADQLNMSGLNIQDQQNQPRSYIPPHMRKMNGGPPPPAPAAAAAMNGGGGINNSAWAGRG
QQNFDARAPAGGDWPAMGGPGGPGGPPGPPPAQQQSFAPRGGRGGWQEGGGRGGYSGGGY
GGHAGGGGGQQARGSGDGQWRDGKHIPGPANPRVERELFGTGVDDSSKQQTGINFEKYDD
IPVEASGHDVPEPVLTFSNPPLDNHLIGNIEMARYKVPTPVQKYSIPIVMGGRDLMACAQ
TGSGKTGGFLFPILSQAFINGPSTVPPNAAGGFGRQRKAYPTSLILAPTRELVSQIYEES
RKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVL
DEADRMLDMGFEPQIRRIVEGEDMPNVQNRQTLMFSATFPRDIQMLARDFLKDYIFLSVG
RVGSTSENITQKVEYVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFP
ATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVH
RIGRTGRAGNTGHSTAFFNRGNRGVVRELLDLLKEANQEVPSFLETIARESSFGGGRGGR
PRGGGRGQGANRDFRKFGGGGGGGGFGGAPGGGFSGGGGAGGGYSAGGGGGGFGGPPPAA
GGFGGGAGGYGGGGGGYGGGSYGNPGGGNSSWW
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagctcaacatgtctggcctgaacatccaggaccagcagaaccaaccccgc
tcctacattcctccccacatgcgtaagatgaatggtggtccccctcctccggctccggcg
gcggcggcggcaatgaacggcggcggtggtatcaacaacagcgcctgggctggtagaggc
caacagaatttcgatgcccgcgcgcccgccggtggtgactggcctgccatgggcggcccc
ggaggtcctggaggtcctcccggccccccccctgcccagcagcagtccttcgctcctcgt
ggtggccgtggtggctggcaagagggcggcggtcgcggcggatacagcggcggcggctac
ggcggccacgctggtggtggaggtggacagcaggcccgtggttctggcgatggccagtgg
cgcgacggcaagcacattcccggccctgccaacccccgcgtggagcgcgagctcttcggt
actggcgtggacgactcgtccaagcagcagaccggtatcaacttcgagaagtacgacgac
attcctgttgaagcttctggacacgacgtccctgagccggtcctcaccttctccaacccc
cctctcgataaccatcttatcggcaacatcgagatggctcgctacaaggtccctaccccc
gtccagaagtactcgattcccatcgtcatgggcggtcgcgatctcatggcttgtgcccag
actggttccggaaagactggtggtttcctcttccccattctctcccaggccttcatcaac
ggtccttctaccgttccgcccaacgccgccggcggttttggccgtcagcgcaaggcttac
cccacttcgctgattctggctcctacccgtgagctggtttcccagatctacgaggagtcc
cgcaagtttgcgtaccgctcctgggttcgcccttgcgtcgtctacggtggtgccgacatc
ggttcccagctccgtcagatcgagcgcggctgcgacttgctcgttgctacccctggacgt
cttgtcgacctcatagagcgcggtcgtatctccctccagaacatcaagtaccttgtgctc
gacgaggctgaccgcatgcttgacatgggtttcgagccccagatccgccgcattgtcgag
ggcgaggatatgcccaacgtccagaaccgccagaccctcatgttctccgccacattcccc
cgcgacattcagatgctcgctcgcgacttcctgaaggactacattttcctgtctgtcggt
cgtgttggttccacctccgagaacatcacccagaaggtcgagtacgttgaagacgtcgac
aagcgctctgtccttttggacattctccacacccacggtgctggtctcactctcattttc
gtcgagaccaagcgcatggccgactctctgtccgatttccttatcaaccagaacttcccc
gccacctcgattcacggtgatcgcactcagcgcgagcgtgagcgtgccctggagttcttc
cgcaacggtcgttgccccattttggttgctaccgctgttgccgcccgtggtctcgatatt
cccaacgttacccatgttgtcaactacgacctgcccaccgacattgacgactacgtccac
cgtatcggtcgtactggtcgtgccggaaacactggccactccactgctttcttcaaccgt
ggcaaccgtggtgtcgttcgcgaacttcttgacctccttaaggaggctaaccaggaggtt
cccagcttcctcgagaccattgcccgtgagtcctccttcggcggtggccgtggcggtcgt
cctcgtggcggtggccgtggacagggcgccaaccgtgacttccgcaagtttggcggcggt
ggcggtggtggcggcttcggaggtgcccctggcggtggcttcagcggaggtggcggtgcc
ggcggtggctatagcgctggcggcggcggtggtggtttcggtggccccccccctgctgcc
ggtggcttcggcggcggcgctggcggttatggtggtggtggtggtggctacggcggcggt
agctacggtaaccccggtggcggaaactcgtcctggtggtaa
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