Colletotrichum higginsianum: CH63R_04174
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Entry
CH63R_04174 CDS
T08176
Name
(RefSeq) Small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_04174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_04174
03032 DNA replication proteins [BR:
chig03032
]
CH63R_04174
Spliceosome [BR:
chig03041
]
Complex A
U1 snRNP components
Sm proteins
CH63R_04174
U2 snRNP components
CH63R_04174
Complex B
U1 snRNP components
CH63R_04174
U4/U6.U5 tri-snRNP components
CH63R_04174
Complex C
U2 snRNP components
CH63R_04174
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CH63R_04174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
MIF4G_like_2
Hfq
Motif
Other DBs
NCBI-GeneID:
28863256
NCBI-ProteinID:
XP_018160395
UniProt:
H1VXC0
LinkDB
All DBs
Position
3:2047353..2047945
Genome browser
AA seq
118 aa
AA seq
DB search
MSTNPKIQELLTKTRNELTEYEIAQLEEHEFSAGPLSILQTAVRSHTQVLISIRNNRKLL
ARVKAFDRHCNMVLENVKEMWTETPRLANGKKGRPVNKDRFISKMFLRGDSVILVLLS
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaatcccaagattcaggagctcctcaccaagacccgcaacgagctcaccgag
tacgagatcgcccagctcgaggagcatgagttcagcgccggacctctttcgatcctccag
accgccgtgcgcagccacacccaggttctgatctccatccgaaacaaccgcaagcttctt
gcgcgcgtcaaggcctttgacaggcactgcaacatggttctcgagaatgtcaaggagatg
tggacagagaccccgcgccttgccaacggcaagaagggccgtcccgtcaacaaagaccgc
ttcattagcaagatgttcctccgtggtgatagcgtcattctggttcttctgagctga
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