Colletotrichum higginsianum: CH63R_04225
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Entry
CH63R_04225 CDS
T08176
Name
(RefSeq) Cap binding protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
chig03015
mRNA surveillance pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_04225
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_04225
03015 mRNA surveillance pathway
CH63R_04225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_04225
03041 Spliceosome [BR:
chig03041
]
CH63R_04225
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CH63R_04225
Spliceosome [BR:
chig03041
]
Common components
Common spliceosomal components
Cap binding complex
CH63R_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
Tape_meas_lam_C
Motif
Other DBs
NCBI-GeneID:
28863307
NCBI-ProteinID:
XP_018160446
UniProt:
A0A1B7YIM3
LinkDB
All DBs
Position
3:2250126..2252715
Genome browser
AA seq
803 aa
AA seq
DB search
MGDYERRRHNGGGGGGGGGGYNNRKRRYRDDDDNDHRQSRRRIDTAPLPVRVRRQLLSLA
ESPLRRWHDEVQGIAHVVAENAEDVELRESFIGLVLQLSLEQPLKTPFVAGVILLVNTLK
PEIVDEILAKLSAAIQERILSGEWRDVKLYLKLLACLQSSLDGEGVFPVLEELFGRAVDL
QTASSDDTIGTELVKIILLTIPYIMAAAPGQWQQKAADLMDKTEIIASEPHALQALIDPY
IPEKEDQPTGSMSVIALLQKQLQHEAANGWELSCLPRPWKLPLEEIEAQEKLDSATKHSL
PPIAVPEKIVAGSRPLFPEVYFSVYSNQEVESVPPVTDIAASLVRDGLVDTINILDYNRN
VTARYLIDLDCYFSDTTFVKRATPFDRLRDIESGRSTWKPEDVAVDAVFSQLFQLPTPEH
KLVYYHSVLTEACKIAPAAIAPSLGRAIRHMYRNSSRMDLELSQRFVDWFSHHLSNFGFT
WKWTEWVDDVYLPDLNPQKAFIIGALDKEIRLSFAQRIKGTLPEPYQPLIGPEKEKDVPD
FKFNDDSTPFAAEGREIAALLRRKAPDEEFQPIIERIHSLAIERSLDPLVTSTDIFVTAV
CWVGSKSLSHVLACIERTKDRLLDVGAASEVAKAQIITAVMSYWAAQPGVAISIVEKLLN
YSILLPTTVIEWALVGGNHVEGQSSGDALAQPHVFELVFGTVAKVTGRVRQLLTKEAEAD
EEAKERETKAMRDLFKSMEDALVSWASGSKDEMMEEVDGAGQRDALLRRWGERWLRVFRR
RSAIEEAFILEANKEQATAANEV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggcgactacgagagaaggcgccacaacggtggcggcggcggcggcggcggcggcgga
tacaacaacaggaagagaaggtatcgagatgacgatgacaacgaccaccgacagtcgcga
cgaagaatcgataccgcgcctctgcccgtgagggttcgcagacagctcctctctctcgct
gaatcacctctccgccggtggcatgacgaggtccagggcatcgctcacgtcgttgccgag
aacgcggaggacgtcgagcttcgcgaaagctttattggtcttgtcctgcagctatcgttg
gagcagcctctcaagacgccctttgtcgctggtgtgatccttctggtgaacacgcttaag
cccgagattgtagacgagatcttggcgaagctgagcgccgcgattcaagagaggatccta
tccggcgaatggcgggatgtaaagctctatctgaagctgttggcttgcttgcagagctct
ctcgacggcgagggagtcttccccgtcctggaggagttgttcggccgggctgtcgacttg
caaacagcaagctctgatgatacaattggcaccgagctggttaagataatacttctcaca
atcccgtacattatggcagcggcccctggtcagtggcagcagaaggccgccgacctcatg
gacaagacagagatcattgcctcggagcctcacgcgttgcaggcactcatcgacccgtac
attccggagaaggaggatcagcccactggctccatgagcgtgatcgcattgctccagaag
cagctgcagcatgaagcagcaaacggctgggaattgtcttgtcttcctagaccctggaaa
ttgccgctcgaggaaatcgaggcacaggagaagctggacagtgccacgaagcacagcctc
cccccgatcgcggttcccgagaaaatcgtcgctggttctcggcctttgtttcccgaagtc
tacttctcggtatacagcaaccaagaggtcgagtcggtgccgcctgtgacggacatcgct
gcttcgctggtaagagatggattggttgatacgattaacattctggactacaaccgtaac
gtcactgcgcgatacctcatcgacttagactgctacttctccgacaccaccttcgtcaag
cgagccactcctttcgacagactaagagatattgaaagcggccgctcaacgtggaagcct
gaagacgtggccgttgacgccgtcttttcgcagctctttcaactccccacacctgagcat
aagctcgtttactatcactcagttctcaccgaggcgtgcaagattgcacccgcggccatt
gcccccagtttgggtcgagcaatccggcatatgtatcgcaactcgagccgtatggacctc
gaactctcccagaggtttgtcgattggttctcgcatcacctaagcaactttggcttcact
tggaagtggacggagtgggttgacgatgtctacctgcctgacctcaatcctcagaaggcg
ttcatcatcggcgcattggataaggaaatccgactcagcttcgcgcaacgcatcaagggc
acgcttcctgagccctatcaacccctgattggacccgagaaggagaaggatgtcccggat
ttcaaattcaatgatgacagcactccatttgcagccgagggccgcgagattgccgcgttg
ctgagacgtaaagcaccagacgaagagttccagccgatcattgaacggatccactcactt
gcgatagagcgcagtttggatcctttggtgacaagcactgacattttcgtcacggccgtc
tgctgggttggatccaaatcactcagtcacgtcctggcgtgtattgaacgcaccaaggac
cgtctgctcgatgtaggcgcggcatccgaggtggctaaagcccaaatcatcaccgctgtc
atgtcatactgggcggcacaacccggcgttgccatatcgatcgtcgagaagctcctaaac
tactcgattctactgcccaccacagtcatcgagtgggctcttgtgggcggcaatcacgtc
gagggacagtcttcgggcgatgccttggcgcaaccgcacgtcttcgagctggtgttcgga
accgtggccaaggtgacgggtcgtgtcaggcaattgttgacaaaggaagccgaggcggat
gaagaagcaaaagagagggagaccaaggctatgcgcgacctgttcaagtctatggaggat
gctttggtgagctgggcttcgggcagcaaggacgagatgatggaggaagtggatggcgcc
ggccagcgcgacgctctactccgccgatggggtgagagatggctgagagttttccgacga
agatcggccattgaggaggcatttatcctcgaggcgaacaaggagcaagctactgctgcc
aacgaagtctaa
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