Colletotrichum higginsianum: CH63R_04313
Help
Entry
CH63R_04313 CDS
T08176
Name
(RefSeq) Garp complex component
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chig01009
]
CH63R_04313
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_04313
Protein phosphatases and associated proteins [BR:
chig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CH63R_04313
Membrane trafficking [BR:
chig04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
CH63R_04313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
EXOC6_Sec15_N
Syndetin_C
Vps54_N
Ntox28
DUF5364
Motif
Other DBs
NCBI-GeneID:
28863395
NCBI-ProteinID:
XP_018160534
UniProt:
H1VBA4
LinkDB
All DBs
Position
3:2549150..2552716
Genome browser
AA seq
1132 aa
AA seq
DB search
MYSSPPGARRSVDTISSLSPPPTRGEFPFHKQGHAHPNHTARRGSTASSIHSVGGSLDTS
SSSWATAVLESGQNAISTLLQPPIVRTGLQPHTSAPASSAHKPPTARDIPPVTLTNIPHI
DPAEFKPYLSQVGALYEQLRRVKEQEEERPGSSSRRSSKHDDFADPLDEGHLKPAGRLPG
RRKSSIASIASISSIDGPGPLRRSSSGFNRKGGHGPPPLSTIPNVYFDDDFHLENPRIFD
VVSERSEVVPPAPGSADDKAGNNGSVVAPRKALATNAILQEKLSWYMDTIEVHLINSIST
ASTTFFTALGSLRELHSEAAESVDRIKALRKELEALDEEIATRGLNIVQKRRRRENVQAL
NDAVLQLRQIVEGVVSCESLVDAGEIDKALSSIDTLELLIAGEHDESPEAEPPVLPLSRL
RDLRGATALQGVNDDLQQLRSRIGKAYESKVQSLLLADLRRHVESVQSRDVLLRWGSSSL
RARGGTARDTTGPPAYLTSTQELRKAIMPNLLGLHRAQHISTAIAGYREAVLREIRNLIR
RPLPSSNDDDNESMMSASTMSGGRNLSNQEKSSILARNLRALDPKDAEDLLKTVYIGVTE
TLRRLTTQVKVLLDIASCLTEEATAAGLKSPPIRSPLASPTPFDREFPRFDDSPSFEVQE
EIHKAMDIANLVGQAVDVAQDKIVKVLKVRSEQSTHLSLTWFLRYFTLNLFFANECEAIS
GRSGTALKTLVNGHIKEFVQQHGDAEKQKLAQGMESDQWSAKDFNEKDKALLNQVLESST
KDAVAWSDGSKIWDENQEEDGLNGATTDPPETNGTGGKEKARTAEVESETFLLPNSAILC
LEGISHFLHLIGGIPSMAADVATSLITYLQLFNSRCTQLILGAGATRSAGLKNITTRHLA
LASQALSFIVTLIPHIREFVRRHAGSGAGVSSLMGEFDKVRRLFQEHQNSIYDKLVEIMS
GRASQHSKSMKTIDWDHDEGQSVHAYMETLAKETTTLHRVLTKHLPETSVQLIMGPVFAS
YKDQFGKVFQAADPKTTVGRDSMLRDVDFFIAKLGKLDGFRDAGDYLKGIVNSKEIKSAA
ASPPPSEKQADGGSESTASARNSTAEPGSRQSAEGSAKAESPPAVEEPKQAS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtactcctcaccaccaggcgcccggaggtcggtggacacgatatcgtcgctatcgcct
ccgcccacacgcggcgagtttccattccacaaacaaggacatgctcacccaaaccacact
gcgagacggggctcgactgcgagctccatacactcagtcgggggttctctcgatacttca
tccagcagttgggcgacagccgtgctggaatctgggcaaaacgccatatcaaccctactc
caaccgcccattgtccggaccggcctgcagccccatacatccgcccctgcttccagcgcg
cataaacctccgaccgctcgcgatattcctcccgtgaccctgacgaacatcccccatatc
gacccggccgagttcaaaccgtatctgtcgcaagttggcgctctctacgaacagcttcgg
cgagtaaaggaacaagaagaagagcggcccggctcctcaagccgtcgatccagtaaacat
gacgactttgcagacccgcttgatgagggtcatctgaaacccgcgggccgactgcctggt
agacggaaatcgtccatcgcgtcaatagcatcgatatcttccatcgatgggccagggcca
ttgcgacgctccagctctggatttaaccgaaagggtggacacggcccgcccccgttgtca
acgatacccaacgtctactttgacgatgactttcacctggaaaatccaagaatcttcgac
gttgttagcgagaggtcggaggttgtgccgcctgcaccaggaagtgcagacgacaaggct
ggcaacaacgggagtgttgtagctccccggaaggctttggctacgaatgcaatcctgcaa
gagaaactctcctggtacatggacactatagaggtccatttgatcaactccatatcgact
gcgtcaacgaccttcttcaccgcactcggctcactgcgcgagttgcattccgaggctgca
gagtcagtggatcgcatcaaagcgctccgaaaggaactcgaggccctcgacgaggaaatc
gcaacccggggcttgaacatagtgcagaagcgccggcgacgagaaaatgtgcaagccctc
aacgacgccgtcctacagcttcggcaaatcgtcgagggtgttgtttcgtgcgagtctctg
gtggatgctggcgaaatcgacaaggccttgagcagtatagacaccctagagcttcttata
gccggtgagcacgacgaatctcccgaagcggaacctcctgtgctcccgctgtcacgcctg
agagacttgaggggcgcaacagctttgcaaggcgtcaatgacgatctgcagcaactgcgg
tcccgtatcgggaaagcttacgagtccaaggtacagagcttgttgctcgccgatttgcga
agacacgtcgagtcggttcagagccgtgacgttctcctccgttggggcagctcgtcattg
cgggcgaggggtggcaccgcaagagacaccactggaccaccggcctatctcacctccaca
caggaactgcgcaaagccatcatgccgaacctcctcggccttcatcgggcccagcacatt
tctactgcaattgcaggctaccgggaggctgtactgcgcgaaattcggaacctaattcgc
cgaccgttgcccagctccaacgatgacgacaacgaatccatgatgtctgcttcaacaatg
agcggcggacgaaacctatccaatcaagagaaatcatccatcctggcgaggaaccttcgg
gcactcgatcctaaagatgccgaagacctgctgaagacggtgtacattggcgtcactgag
acgctccgtaggctaacgacacaggtcaaggtgcttctcgacatagcgagctgtttgaca
gaagaagctactgctgctggtctcaagtcgccaccgatacgctctcccctcgcgagccca
acgccgttcgaccgggaatttccccggttcgacgactctcccagcttcgaagttcaggag
gagatccacaaggctatggacattgccaatctggtgggacaggccgtcgacgtggctcaa
gacaagatcgtgaaagtgttgaaggtgcgatcggagcagagcacgcatctgagcctgact
tggttccttcgttacttcacactcaatctcttcttcgccaacgaatgcgaggcgatctcg
ggacgcagcggcacggcgttgaagactctggtcaacggccacatcaaggagttcgtgcag
caacacggcgacgcggagaaacagaagctggcgcagggcatggagtcggaccaatggagc
gccaaagactttaacgagaaggacaaggctcttcttaatcaagtgctcgagagcagtacc
aaggacgcagtagcgtggtcagacggcagcaagatctgggatgagaaccaagaggaggac
ggcttgaacggagccacgacggacccacccgaaacaaatggcactggcgggaaggaaaag
gcgcgaactgcagaggtcgagagcgagacatttctgctgcccaactctgccatactctgc
cttgagggcatctcgcattttcttcacctcatcggtgggattccgtccatggccgccgac
gtcgccacctccctcatcacatatctgcagctcttcaactctcgctgcacccaactcatc
ctcggtgcaggtgccactcggtctgctggtctgaagaacatcacgacgagacatctggcc
ttggcatcccaggcgttgtcattcattgtaacattgatcccccacattcgggagttcgtt
cggcggcacgctggctcaggagccggtgtgtcaagtctgatgggagagttcgataaggtt
aggcgcctgttccaggaacatcagaacagcatctacgacaagctggtcgagatcatgagc
ggacgcgcatcgcagcactccaagtccatgaagacgatcgactgggaccacgacgaaggc
cagtcggtacacgcatacatggagacgctggccaaggaaaccaccactctacacagggtg
ctgactaaacacctgccggaaacctcggtgcagctgatcatgggccctgtcttcgcaagc
tacaaggaccagttcggcaaggtcttccaagccgcggacccaaagacgactgttggtcgt
gacagcatgctccgagacgtggatttcttcatagcgaaactcggcaaactggacgggttc
cgggacgcgggcgattacttgaagggcatcgtcaactccaaggagattaagagcgccgct
gcatctccaccgccgtcggaaaaacaggcagacggcggatcggagtcaacggcgtcggcc
aggaattcgacggccgagccaggaagcagacagagtgcagaggggtcggcgaaggccgag
tcgccgccggctgtcgaagagcccaagcaggcatcatga
DBGET
integrated database retrieval system
