Colletotrichum higginsianum: CH63R_04440
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Entry
CH63R_04440 CDS
T08176
Name
(RefSeq) Helicase associated domain-containing protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
chig03012
]
CH63R_04440
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CH63R_04440
Translation factors [BR:
chig03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CH63R_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_DHX29
Helicase_C
OB_NTP_bind
HA2_C
DEAD
RWD
ResIII
HA2_N
nSTAND3
UBA_DHX29
Cas3-like_C_2
dsRBD2
ATPase
AAA_22
AAA_29
DND1_DSRM
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
28863522
NCBI-ProteinID:
XP_018160661
UniProt:
A0A1B7YJS0
LinkDB
All DBs
Position
3:complement(2977621..2981711)
Genome browser
AA seq
1342 aa
AA seq
DB search
MAPPKKGKGKDKGAVAAPAAQPAASSSKDGAKSKKTAGLSLMEQAAGPAANKPTVKQIIG
GSSWTGKLPQNLFNEYCQKQQWEKPVYDMRKTPEGYACFVTVSAKDPKTKELMTLDPFKI
APDYKHLLTRPTALEARHAAATYALFRVCSMQNKHTVLPPDYKSMWKDFQDIKKQDVKDG
KAWMYDADPFKTLRERQDSKAAAEKKRKEAEAAKEKAKSMPGASGLSASNAMKGWITAPK
IEMGKRSRTQVEALIQKYVTWNPNKVQMPAMQKKAIIDELSKLNFRRSHVEEATEICKDR
EETLEWLLIHVPEDDLPRWALPESYAAGISVASMDLKKEGAIKRLSESGYAPDLCARVLE
EAGGSEGKAAELLQQRLVGQLSEDAQRSTVEELLPPGVSADELWDDEVSAMESSFGDHFK
KTSPDIIEVKLEKVKNVGKPVEAAVQVRKTPNYPAQLIFAVVAPLPAQIKLSIIKQTLAY
LEDSYWEEPMKVFVAIDWIQQNVNSIIERPGKLSEISAVASTASEVPSEARPQRPPTKTQ
RLPKPISWTPDSRTRDEWLRRTEEPAWEKMMSKRQKLPAWQVREKIINTVEHNHVTIISG
ETGSGKSTQSVQFILDDLYNRGLGKCVNMLVTQPRRISALGLADRVAEERCTRVGDEIGY
AIRGENRRSNNTKITFVTTGVLLRRLQTSGGKIEDVAASLADVSHVVIDEVHERSLDTDF
LLTIVREVMKERKNLLKLVLMSATLDAASFNYYFTSQGLDVGMVEIAGRTYPVDDYYLDD
IISMTGFRGDAGDADGGRGDAMGKTIQKLGHRINYDLLAETVREIDADLSHSHKTGGILI
FLPGVAEINRACGALRSINSLHVLPLHASLETKEQKRVFTSPPSGKRKIVVATNVAETSI
TIDDIVAVIDSGKVKETTYDPVNNMRKLEENWASQAACKQRRGRAGRVQAGKCYKLYTRN
LEQQMAERPDPEIRRVPLEQMCLSVRAMGMRNVAGFLSQSPTPPDSTAVDGAIKLLRRMG
ALDGDEMTALGQQLAMIPADLRCAKLMVYGAIFGCLDDCVAIAAILSTRSPFMSPPDKRD
QAKDARMRFSNGDGDLLTDLEAFKQWDEMRGDGVGQRQLRNFCDDNFLSWLTLNDISATR
MQYYSALSEIGIVETNRFAAAQSRSKSGMTLLRALTASAFNPQIARIQYPDKKFTNTVSG
TKELDPEARTIKYFTQEQGRVFVHPSSTLFGSQGFTGNASFMSYFTLISTSKTFIRDLTP
FNAYTLLLFSGAISLDTLGRGLVVDEWVRLRGWARLGVLVSRLRGMVDDVIAMKIENPGL
DLTDNEVIKMVGKLIELDGLDA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccaagaaaggcaagggaaaggacaagggcgccgtagccgccccagcagct
caacctgccgcatcgtcctccaaggatggtgccaagagcaagaagaccgctggcttgtcg
ctcatggagcaggctgccggcccagccgccaacaagccgactgtcaaacagattatcggc
gggtcatcatggacggggaagctgccccagaacctcttcaacgaatactgccagaaacag
cagtgggaaaagcccgtctacgacatgcgaaagacccccgagggatacgcttgcttcgtc
accgtcagcgcaaaggacccgaagaccaaggagctcatgaccctggacccgttcaagatc
gcccctgactacaagcaccttctcacaaggcccaccgccctggaggctaggcacgccgcg
gcaacttacgccctcttcagggtctgcagtatgcagaacaagcacactgttctgccgccg
gactataagtccatgtggaaggacttccaagacatcaagaagcaggatgtgaaggacggc
aaggcatggatgtacgacgcggacccgttcaagactcttagagagaggcaagattccaag
gcagccgcggagaagaagagaaaggaggccgaggcggccaaggagaaagcgaaatccatg
cctggcgcatcaggattgagcgcgtccaacgccatgaagggctggatcacagcgccaaag
attgagatgggcaagcgctcgcggacgcaggtcgaggctctgattcaaaagtacgtcacc
tggaacccgaacaaggtgcagatgccggcaatgcagaagaaggccatcatcgacgagctc
agcaaattgaacttccgacgaagccatgtggaagaagccacagagatctgcaaagatcgt
gaggagacgctggagtggctgttgattcacgtacccgaggacgacctaccccgttgggcc
ctgccagagagctatgccgcgggaatctcggtcgcatcgatggatctcaagaaggagggt
gccatcaagcgcctctccgaatcaggctatgcccctgacctctgcgctcgcgttctggaa
gaggccggcggaagtgagggcaaagcagctgagcttcttcagcaacgcctcgtgggccag
ctgtcggaggacgcacagcggagcaccgtggaggagcttcttccaccgggcgtctcggcc
gatgagctgtgggacgacgaagtgtccgcgatggagtcttccttcggcgatcatttcaaa
aagacctcacccgatatcatcgaggtcaagctggagaaggtaaagaacgtaggcaagccg
gtagaagcggcagttcaggtccgcaagacgcccaattaccccgcccagctcatcttcgcc
gtcgtggcgcccctcccggcgcaaatcaagctgtccatcatcaagcagactcttgcctat
ttggaggattcctattgggaagagcccatgaaggtttttgtggccatcgactggattcag
cagaacgtcaacagcatcatcgaacggcccgggaagctttccgagatctctgcggtggca
tcgacggcatccgaggtccctagcgaggctcgaccgcagaggcccccaacaaaaacacag
aggctgcccaagcccatctcgtggacacccgattctcggacacgagacgagtggctgaga
aggaccgaggaacctgcctgggagaagatgatgtcgaagcgccagaagttgccggcgtgg
caggttcgtgaaaagatcatcaacactgtcgaacacaaccatgtcaccatcatcagcgga
gagactggttctggcaagtcgacgcagtcggtccaattcatcttggatgatttgtacaat
agggggctgggtaaatgtgtgaacatgctggtcactcagcccaggagaatctccgcactc
ggtctggccgaccgtgtggccgaggaacgatgcaccagggtcggagacgagattggttac
gccattcgtggcgagaaccgccggagcaacaacacgaagatcacgttcgtgacgactggt
gtgctactcagaaggctgcagacctctggtggaaagatcgaagatgtcgcggcatcgcta
gctgacgtcagccacgttgtcatcgacgaagtgcacgagcgcagtttggatacggacttc
cttctcaccattgtcagggaggtcatgaaggagagaaagaacctcttgaaactggtgctc
atgagtgccactcttgatgccgcatctttcaactattacttcacctcccagggcctggac
gtcggcatggtggagatcgccggaaggacataccctgttgacgactactacttggacgac
atcatcagcatgacgggcttcaggggcgacgcgggtgatgcggacggtgggcgaggcgac
gcgatgggcaagacgatccaaaagctgggtcaccgcatcaactacgaccttctcgcagag
actgtaagggagatcgacgcagacctctctcattcgcacaagacgggaggaatcctcatc
ttcctccccggagtggcggaaatcaatcgggcttgcggcgcgcttcggtcgatcaactcg
ttgcatgtgctcccccttcacgcctctctcgagacgaaggagcaaaagcgcgtgtttacc
agcccacccagcggtaagagaaagatcgtggttgctaccaacgtggcggagacgtcgatt
acgattgacgacatcgttgccgtcatcgacagcggcaaggtgaaggagactacgtatgac
cctgtgaataacatgaggaagttggaggagaactgggcatcccaggcggcctgcaaacaa
cgacgaggccgtgcaggcagagtccaggcgggcaagtgctacaagctctacaccagaaat
ctcgagcaacagatggccgaacgtcccgatcccgagatcaggcgagtgccgctggagcag
atgtgtctttcagtgcgcgccatgggaatgaggaacgtggccgggtttctttcgcagtcg
cccacgcctccagacagcacggcggtcgacggagctatcaagctgctgcggcggatgggt
gcgttggacggagatgaaatgacggccctaggacagcagctcgccatgatcccagccgat
ctccgatgcgcaaaactcatggtttacggtgccatttttgggtgtttggatgactgtgtc
gcgattgcagccatcctcagtacccgcagcccttttatgtcgcctccggacaagcgagac
caggcaaaggacgcacgcatgcgcttctccaacggcgacggcgacctccttaccgacctc
gaggccttcaagcagtgggacgagatgaggggcgacggcgtaggtcaacgccagctgcgc
aacttctgcgatgataacttcctctcgtggctcacgctgaacgacatatcggcaactcgg
atgcagtactactcggccctttccgagattggaatcgtcgagacgaaccggtttgcggcg
gcgcagagtcggagcaagtccggcatgacgcttctacgagcgctcacggcttcagcgttc
aacccgcagatcgcgcgcattcagtaccccgacaagaagttcaccaatacggtttctggt
acgaaggagctggacccggaggcgcggacgatcaagtacttcacccaggagcagggccgc
gtgtttgtgcaccccagcagcacgctgttcggcagccaggggttcaccggcaacgcttcg
ttcatgtcatacttcaccctgatctccactagcaagacgttcattcgggacctgacgcct
ttcaacgcatacacgttgcttttgttctcgggtgctatcagcctggataccttgggaaga
ggacttgtggtcgatgagtgggtgcgtctccggggatgggcacgactgggagtcttggtg
tcaagactcagaggcatggttgacgatgtgattgcgatgaagattgagaatcctgggttg
gatctcacggacaacgaggtgattaagatggttggaaagctgatagagctggacggatta
gacgcataa
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