Colletotrichum higginsianum: CH63R_04706
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Entry
CH63R_04706 CDS
T08176
Name
(RefSeq) Cdc73 family RNA pol II accessory factor
KO
K15175
parafibromin
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_04706
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CH63R_04706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
Motif
Other DBs
NCBI-GeneID:
28863788
NCBI-ProteinID:
XP_018160927
UniProt:
A0A1B7YK49
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Position
3:complement(<3927345..>3928620)
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AA seq
405 aa
AA seq
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MAAVEQDPLFLLRQSIASKRPAVPTASADASAPEVALSKATHLLFSHPAPVSVLLSTPTR
FISSDRPVDLRSIYFAWLNKDVAIPEYNASATRLNEELGSLGTVQNLAFVERLDLFTWLE
GASEESEHIKPLASDKDGKEGTGASASKTAPATAASRAGRGTLDPRLAVIYNGERKMGDR
NSVLRGVKPTDFSHVRKLAVPFIQKKPHGAASISTNPSLPINQKAPTRRPDPIILLSPSA
SSLLRLSNIRSFLEGGRYVQPDGSAAASMLHVSRVMKDIDPSRPMRFILVEGPEQFKPEY
WNRVVAVFTTGQSWQFKNYKWSSPPDLFRRVLGIFIGWRGEQPPDSVKEWGHRVLQLGVD
RWRDGTGAQEAAKFRDKEAAESIWRAIEANMKNKGWTKTTAPSQL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttgagcaggatcccctgttcctgctacggcaatccatcgcatccaagcga
cctgcagtcccgacagcgtccgccgatgcgtctgcacccgaagtagccctctcgaaagcc
actcatctgctcttctctcacccagccccagtatcggtattgctttcgacacccacgcgc
ttcatctccagcgaccgccctgtcgacctgcgatcaatttacttcgcttggctgaacaag
gatgtcgcaattcccgagtacaatgcaagcgcgactcgcctcaacgaggaattgggcagc
ctcgggacggtccagaaccttgctttcgtcgaacgtctagatctgttcacctggctggaa
ggcgctagtgaagagagtgagcacatcaagccgttggccagcgacaaggacggcaaggag
ggaactggcgcgagcgcgtctaagactgcgccggcgaccgcagctagccgagctgggcgc
ggcacattggaccctcgactggcggttatctataacggcgagcgcaagatgggtgaccgc
aactcggtgttgcgcggcgtgaagcccacagacttctcccacgtccgcaagctcgccgtt
ccctttatacagaagaaacctcatggcgcagcgagcatcagcacgaacccgtcgctcccc
atcaaccagaaggccccgacgcgtcggccggaccccatcatcctcctatcgccttccgcc
tcgtcactgctccggctgtccaatattcgatccttcctcgagggaggacgttatgtgcaa
cccgacggcagtgccgccgccagtatgctgcacgtctctcgtgtcatgaaggacatcgac
ccttcgcggcccatgcgctttatccttgttgaaggccccgagcagttcaagcccgagtac
tggaaccgcgtcgtcgctgtcttcaccacgggccagtcttggcagttcaagaactacaag
tggagctcccctccggacctcttccgccgcgttctgggtatcttcatcggctggcgcggc
gagcagccgcccgacagcgtcaaggaatggggacatcgtgtgttgcagctaggtgtcgac
agatggcgtgacggtactggagctcaggaggctgcgaagttcagggacaaggaggccgcg
gagtcgatctggagggccatcgaggcgaacatgaagaacaagggatggacgaagaccacc
gcgcccagtcaactctga
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