Colletotrichum higginsianum: CH63R_04820
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Entry
CH63R_04820 CDS
T08176
Name
(RefSeq) WD repeat domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_04820
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CH63R_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Cytochrom_D1
Beta-prop_Nup120_160
DUF7165
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_2
PEP5_VPS11_N
VPS8_N
Motif
Other DBs
NCBI-GeneID:
28863902
NCBI-ProteinID:
XP_018161041
UniProt:
A0A1B7YKR2
LinkDB
All DBs
Position
3:complement(4312902..4316242)
Genome browser
AA seq
1054 aa
AA seq
DB search
MPSTMPHSENDGPLVKRQKLTVVSKSATATRQSSRIFAPFRTVGLVSPTNVPFTSIPLGK
TTFQITTSVGRALQTYDLKRGLNLVFVTRPQTPADITATLAWKEKVFAAWGDARKGERQG
IWAFKRGKKVEELEIPGDLDEPIQQILIFGSWIVGCAVTRLEVWKSATLEHYTTLHTMAG
KKGANEITGGVTNMPTYLNKICVGRKDGWVEIWNVSTGKLIYTILPPTPDCGAVTCMQPT
TALSLLAIAYANGTLVIQNILTDKPIVLLKAGHDDEPVTSISFRSDGMGAGHDGRKDGVM
ATATAATGDVTFWDLNNGGRVMGVLRSAHNPPSGNGPLVRGGISKIEFLSGQPVVVTSGR
DNSLKTWIFDESPFSAIPRILHQRSGHAAPVKCLQFLPSDFEGADAGNKWLLSGGQDRSL
WGWSMRRDGQSTELSQGNIRKMAKKTGILSTKALARGPTTTLEDLKAPEITCIASSLNRD
GGIGAIPGNHPIWQKHGNTKKQLDAEVSGSTGWESVVTAHKNDAYARTWFWGRKKAGRWA
FPTGDGSHVSTIAMSPCGTFALVGSVEGGLDMYNLQSGLHRQRFPSKLTPAQARAMKMQQ
LRQADNVVQLHTERDSHFAPGTGRHTKAITGIVVDSMNKNVITCSLDGKIKFWDFLTGNL
VHQINWAPMTAITGCRYHAANDLMAFSCDDNSIRVVDLETKRTIREFWGCQGAINDFCFS
NDGRWVIAASQDCVVRVWDLPTSHLIDAIRLEKACTALAMSSTGEYLAATMENELGVAIW
TNKSLFTHVPTRQVSDKEAALLTGPTTSGEGGEGMLEAAFNEDEADGEDETVVAPTVDQL
SAELTTLSLVPKSRWQTLLHLDLIKQRNKPTEAPKAPEKAPFFLPSVGSGKQPQQSSLSL
LEGTAAAATEAEAATSESKSRITKLERGRMQEAFTSKLNDGAISGDFDDFINHLKSLSPS
TADLELRSLSPEDDGLLRFVRALTSRLASRRDYELVQAWMTVFLRLHFDLVMGDAQLLEA
LGEWKTLQEREAGRLDDLVGYCSGVVGFLRSPRT
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgccttccacaatgcctcattcggagaacgacgggccgctggtcaagcgccagaagctc
actgtcgtttccaagtctgcgactgccacgcgccagtcctcccgcatcttcgcacccttc
cgaactgttggtctcgtctcccccacgaacgttcctttcacatcaatcccccttggaaag
acgacgttccagattacgacttctgttggaagagctctgcaaacctacgatctgaagcgg
ggcctcaacctcgtcttcgtcacccgtccccagacgcccgccgacatcaccgcgacgctc
gcgtggaaagagaaggttttcgcagcatggggcgacgcaaggaagggcgagaggcagggt
atctgggctttcaagcgcggaaagaaggtcgaggagctcgagatccccggagacctcgac
gagcccatccagcagatcctgatcttcgggtcgtggatcgtaggatgcgccgtgacgaga
ctcgaagtatggaagtcggccaccctggagcactacaccacgcttcacaccatggctggc
aagaagggcgccaatgagattaccggcggtgtcacgaacatgcccacctacctcaacaag
atctgcgtcggtcgcaaggacggctgggtcgaaatctggaacgtcagcaccggcaagctc
atctacaccattctcccgccgacccccgactgtggcgctgtcacatgcatgcagcctact
actgcgctctctctgctggccatcgcctacgccaacggcaccctggtcatccagaacatc
ctgaccgacaagccaatcgtgctgctgaaggctggccacgacgatgagcccgtcacgtcc
atctctttcagatccgacgggatgggggccggtcatgacggccggaaagacggtgtcatg
gcgaccgccaccgctgcaactggagacgttacattctgggacctcaacaacggaggcagg
gtcatgggtgttctgcgcagtgcgcacaaccctccatccggaaacggccctctggtgcgg
ggtggtatcagcaagatcgagttcttgtcgggccaacccgtcgttgtcaccagcggacgc
gacaactcgttgaagacgtggatctttgacgagagtcccttctcggcgatcccgcgtatc
ctgcaccagcgcagcggacacgccgcccccgtcaagtgcctgcagttcctgccctccgac
ttcgaaggtgccgatgcgggtaacaagtggctgctcagtggtggccaggaccgcagtctc
tggggctggagtatgcgacgtgacggccagagcaccgagctcagccaaggaaacatccgc
aagatggccaagaagacgggcattctgtccaccaaggctctcgcgcgcggccctacgacg
actctggaagacctgaaggcccccgagatcacgtgcattgccagctccctgaaccgcgac
ggcggcatcggcgccatacccggcaaccaccccatctggcagaagcacggcaacaccaag
aagcagctggacgccgaggtcagcgggtcgacgggctgggagagcgtcgtgacagcacac
aagaacgacgcgtacgcccgcacgtggttctggggtcggaagaaggcgggtcgatgggcg
ttcccgaccggcgacggctcccacgtctcgacgatcgccatgagcccctgcggcacgttc
gccctcgtcggctccgtcgagggcggcctcgacatgtacaacctgcagtccggcctccac
cgccagcggttcccctccaagctcactccggcacaggcgagggcgatgaagatgcagcag
ctgaggcaggccgacaacgtcgtgcagctgcacacggagagggacagccacttcgcgccg
ggcacgggcaggcacacgaaggcgatcacgggcatcgtggtggactcgatgaacaagaac
gtcatcacgtgctccctggacggcaagatcaagttctgggacttcctcacgggcaacctc
gtgcaccagatcaactgggcgccgatgacggcgatcacgggctgcagataccacgcggcc
aacgacctgatggcgttttcgtgcgacgacaactcgatccgcgtcgtggatctcgagacg
aagaggacgatcagagagttctggggttgtcagggggccatcaacgacttctgcttctcc
aacgacggccggtgggtcatcgctgcgtcgcaggactgcgtcgtcagggtatgggacctg
ccgacgagccacctcatcgacgccatccggctcgagaaggcgtgcacggcgctggccatg
tcgtcgaccggcgagtacctggcggcgacgatggagaacgagctcggcgtggccatctgg
accaacaagtccctcttcacgcacgtgccaacgcgacaggtgtcggacaaggaggcggcg
ctgctcacgggcccgacaacgtcgggcgaaggcggcgagggcatgctcgaggcggccttc
aacgaggacgaggcggacggcgaggacgagacggtggtggcgccgacggtggaccagctc
agcgcggagctgacgacgctgtcgctggtccccaagagccgttggcagacgctcctccac
ctggacctcatcaagcagcgcaacaagccgacagaggcgcccaaggccccggagaaggcg
ccctttttcctgccgtcggtcggttccggcaagcagccgcagcagtcgagcctgagcctg
ctcgagggcacagcggcggcggcgaccgaggccgaagccgccacctcggagtccaagtcc
cgcatcacgaagctcgaacgcggccggatgcaggaggcgttcaccagcaagctcaacgac
ggtgccatctcgggagacttcgacgacttcatcaaccacctcaagtccctctccccctcg
acggcggacctcgagctccggtccctctcgcccgaggatgacgggctcctgcggttcgtc
cgggcgctgacgagccggctcgcctcgcgacgcgactacgagctcgtgcaggcgtggatg
acggtgttcctccggctgcacttcgacctcgtcatgggagacgcgcagctgctcgaggcg
ctgggcgagtggaagacgctgcaggagcgcgaggccgggcggctcgacgacctggtgggc
tactgcagcggtgtcgtcggcttcctgcggagtcccaggacgtga
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