KEGG   Colletotrichum higginsianum: CH63R_04867
Entry
CH63R_04867       CDS       T08176                                 
Name
(RefSeq) Pre-mRNA-splicing factor cef-1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_04867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_04867
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_04867
Spliceosome [BR:chig03041]
 Complex B
  Other components
   Prp19 complex
    CH63R_04867
 Complex C
   Prp19-CDC5 complex
    CH63R_04867
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CH63R_04867
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect ExoU_mid_dom Rap1_C
Other DBs
NCBI-GeneID: 28863949
NCBI-ProteinID: XP_018161088
UniProt: H1VG52
LinkDB
Position
3:4469299..4471713
AA seq 778 aa
MGVVKGGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWNEWLDPSIKKTE
WSKEEDEKLLHLAKLMPTQWRTIAPAVGRTANQCLERYQKLLDEAEAREAGQLGLTGIDG
GEASAPSADDVRRLRPGEVDPDPESKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQQEESRRLAALQKRRELKTAGINIKVVTRKKGQMDYNADIPFERKAAPGFYDTVE
EQVRNEHQREAFDPRKQQIASKRKGDGDDDGESKRRKKEKDAPSASFQAAVKAGQMQKIR
EAEQSSKRRALNLPAPQVSEGELEEIVKMGMMGERASMMARESDNDATRGLISEYSTLNN
SAPIRTPRAPAQEDHIANEIRNIRALTNTQSSLLGGENTPLHEGSESTGFDGVAPRKQVV
ATPNPLATPMHANGVGQTPARVGQTPMRTPRDSFALNADGTQALVSATPQEVKLRQMALR
SQLKQGLASLPKPKDTEWELELPEDQREVAANEDMLMEDAGERDRREREFRAAQEALEAR
RRTQVMQRQLPRPVKVDVSALLSSAETIQDTAKSLIAREAAALVANDAAKYPLPGSKVSG
IAPRLDTISDDDLAEARLQILSETKPKPSAAEIQASFEGRSKNSFLLGLGCYGDDEEEEE
AAMKEAFESMQDSIATTAEEGIKLEKKLGLHLGGYQKRQKMLKDKIGAAAEALEKADNAL
SGFKTLAISEEVAIQRRLAALRDEVGFVSTREREAQELYRKTKDELDALRANGVNGHY
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgggtgtcgtcaagggaggcgtctggaccaacatcgaggatgaaatcctcaaggcctcc
gtttccaagtatggcctgaaccagtgggcgcgtgtctcgtcgctgctcgcccgcaagacc
ccgaagcaatgcaaggccagatggaacgagtggttggatccgagcatcaagaagacggaa
tggagcaaagaagaagacgaaaagctcctccacctcgccaagctcatgcccacccaatgg
cgcaccatcgcacccgccgtcggccgaaccgccaaccaatgcctcgaacgataccagaag
ctcctcgacgaagcagaagccagggaggccggccagttgggcctcacaggcatagacgga
ggcgaggcatccgcgcctagcgccgacgatgttagaagattgcgccccggcgaagtcgat
ccggaccccgaaagcaagccggcccgacccgatacgatcgatctcgacgaagatgaaaaa
gagatgctgagcgaagcgagagcacgtctcgcaaacacacaaggaaagaaagcgaagaga
aaggctagagaacgtcagcaggaggagtcgcgccgcttggccgccctccagaagcgccgt
gagctcaagacggccggcatcaacatcaaggtcgtcacacgcaagaagggccagatggac
tacaacgccgacatcccctttgagagaaaggccgccccgggcttctacgacaccgtcgaa
gagcaggtccgcaacgagcaccaacgcgaggcgttcgacccgagaaaacagcagattgca
agcaagcgcaagggcgatggcgacgacgacggcgagagcaagaggaggaagaaggaaaag
gatgcgccctcagcatcgttccaagccgccgtgaaggccggccagatgcagaagatccga
gaggccgagcagagcagcaaaagaagggcgctgaacctgccagctccccaggtgagcgag
ggcgaattggaggaaatcgtcaagatgggcatgatgggcgagagggcaagcatgatggcg
cgcgaaagcgacaacgatgcgacgcggggactaatcagcgaatactcgaccttgaacaac
agcgcgccaattcgaaccccacgagcccctgcccaagaagaccacatcgccaacgagatc
cggaacatcagagccttgacaaacacccagtcctcattgctaggcggagagaacacgcct
ctgcacgaaggatccgagtcgaccgggtttgacggtgtcgcccctcgcaagcaagtcgtc
gcaacaccgaaccctctggcgactcccatgcatgccaatggtgtcggccagactcccgca
cgtgttggacagactccgatgaggacacctcgcgacagctttgccttgaacgccgatggg
acccaggccctcgtctcggcgacaccccaagaagtcaaactgcgacagatggcgctgcgc
agccaactcaagcaaggcctagcgtctctgcccaagcccaaagacaccgaatgggagctt
gagcttcccgaagaccaacgggaggtggccgcgaacgaggacatgctcatggaagatgcc
ggtgaaagggatcgccgggaacgcgagttcagggcagcccaggaagctctggaagcgcgg
aggcggacacaagtcatgcagagacagttgccccggccggtcaaagtcgacgtgtccgca
ctgttgtcaagtgccgaaaccattcaggacaccgccaagtcgctcatcgctagagaagct
gccgcgctggtcgccaacgatgctgccaagtatcctttgcccgggtctaaagtcagcggg
atcgcccctcgtttggacaccatcagcgacgatgacttggccgaggcacgccttcagatc
ctgtccgagacaaagccgaaaccttctgcggccgagatccaagcttcattcgagggccgc
agcaagaactcattcttacttggcttgggatgttatggcgacgacgaagaggaagaggag
gcggccatgaaagaggcctttgagtctatgcaagactcgatcgcgactactgccgaggag
ggtatcaagcttgagaagaagctgggcttgcatctgggtggataccagaagcggcagaag
atgctgaaggacaagatcggcgcggccgccgaggcactggaaaaggcggacaatgcactc
agcgggttcaagacactcgctatttcggaagaagtcgcgatccagcgacgtctggctgcg
ttgagagacgaggtcggcttcgtcagcacaagagaacgcgaggcacaagagctgtatcgc
aagacgaaggacgaactcgatgcgctgcgggctaacggggtcaatgggcattactga

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