Colletotrichum higginsianum: CH63R_04921
Help
Entry
CH63R_04921 CDS
T08176
Name
(RefSeq) AP complex subunit beta
KO
K11825
AP-2 complex subunit beta-1
Organism
chig
Colletotrichum higginsianum
Pathway
chig04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CH63R_04921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_04921
Membrane trafficking [BR:
chig04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
CH63R_04921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
INTS1_R4
PDS5
CLASP_N
HEAT_EF3_N
DUF3730
RTP1_C1
tRNA_int_end_N3
Motif
Other DBs
NCBI-GeneID:
28864003
NCBI-ProteinID:
XP_018161142
UniProt:
A0A1B7YKT3
LinkDB
All DBs
Position
3:4618205..4620853
Genome browser
AA seq
708 aa
AA seq
DB search
MSGPQGGGDSKLFARGKVAELRLELNSGGKKDKNNVNKKIALKKIVANMTMSNNDMVALF
PDIISCMHIQSLEIKKMCFLFLVNYARMRPEIAIQAIPVLEQDMEDHNPLVRALALRTMS
YIHVREFVEATVPLVKHMLKDADPYVRKTAAFCVAKLYDHDRRTVEGSDLIDRLNTLLRD
DNPTVVASALASLMDIWERSDAIKLTIDYSNASKMVAILPDCSEWGQTYILEALMSYVPQ
ESGEALLLAERISPRLSHSNSAVVLTCIRVVLYLMNYISDQRQITMLCKKLSPPLVTLLA
KGPEVQYLALRNALLILQRRPEVLRNDIRVFFCKYNDPIYVKVTKLELIFMLANEGNIDE
VLTELREYATEIDVHFVRKAVRAIGKLAIKIEPASRQCINLLLELVATKVTYIVQEATVV
IRNIFRKYPNQYESIIGTLCEHLDSLDEPEAKAAMVWVIGQYADRIENSEALLEDFLYSF
AEEPVEVQLALLTATVKLFIQRPTKGQELVPRVLKWATEETDNPDLRDRAYMYWRLLSTD
MAAAKQIVMGEKPPITAESERLDPATLEEMCLNVGTLATVYLKPVQTVFRSARPRKLLDS
PALQKHLLPTSIENQKSLSMLGMGGQAQDASMHSQHVSQADGNLSQAVNDADAYFNSIGP
QQMAAMRIDQGDVFGETTGYETGYVVNQHAPQQVVQPAQGSNGDLLVL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccccagggtggaggagactccaagttgtttgccaggggcaaggttgctgag
ctgcgactcgagctgaacagcggcggcaagaaggacaagaacaatgtgaacaaaaagatc
gccctcaagaagattgtcgccaacatgaccatgagcaacaatgacatggtcgcgctgttt
cccgacatcatcagttgtatgcatatccagagcctggagatcaagaagatgtgcttcttg
ttcctagtcaactatgcgagaatgcgacctgaaattgccatacaggccattcctgtcctg
gagcaggacatggaggaccacaatccacttgtcagagctcttgccctccgaacaatgtcc
tacatccacgtaagggaattcgtcgaagcgactgtgcccctagtcaagcacatgttgaag
gatgcggatccatacgtcaggaaaacggcagcgttctgtgtcgccaagctttacgaccac
gaccggcgtacagttgagggttccgacctgatcgacaggctcaacaccctgctcagagac
gataacccgaccgtggtcgccagcgcattggcatcgctgatggacatatgggagcgaagt
gacgccatcaagctcactatcgattacagcaatgcatccaaaatggtggctattctcccc
gactgctcagaatggggccaaacatacatcctcgaggcactcatgtcctatgttccccag
gagtcgggggaagccttgcttcttgccgagcgcatttcgccgcgcctttcgcactccaac
tcggctgtggtactgacttgcatccgtgtcgtgctctatctgatgaactatatctcggac
cagaggcagatcacaatgctatgcaagaagctatcacccccactggtgactcttctggca
aagggacccgaggtgcagtaccttgctttgaggaatgcgctcttgatcttgcagcgtcgg
ccggaagtgttgcgcaacgacatccgcgtcttcttctgcaaatacaacgaccccatctat
gtcaaggtcacgaagctggagctcatcttcatgctcgccaacgagggcaacatcgacgaa
gttctcacggagcttagggagtacgcgaccgagatcgatgttcacttcgtccgcaaggcc
gtgcgcgccattggcaagttggcgatcaagattgaaccggcgtcgcggcagtgcatcaac
ctgctcctcgagctggttgcaaccaaggtcacatatatcgtgcaggaggcgacggtcgtc
ataagaaacatcttccgcaagtatcccaaccaatacgagtccatcatcggcacgctgtgc
gagcatctcgactcgctggacgagccggaggcgaaggccgctatggtgtgggtcatcggg
cagtacgcggacagaatcgagaacagcgaggccctgctcgaggacttcctgtactcgttc
gcggaggagccggtcgaggtgcagctggcgctgctaacagcgacggtcaagcttttcatc
cagcgaccgaccaagggccaggagctggtgccccgagtgttgaagtgggcaacggaggag
acggacaacccggatctccgagaccgagcctacatgtattggcgcctgctgtcgacggac
atggcggcggcgaagcagatcgtcatgggagagaagccgccaatcacggccgagtccgag
cggctcgacccggcgacgctggaggagatgtgtctcaacgtggggacgctggcgacggtg
tacctaaagccagtgcagacggtgttcaggtcggcgcggccgaggaaactgctggactcg
ccggcgctgcagaagcacctgctcccgacgtcgatcgagaaccagaagagcctaagcatg
ctggggatgggcgggcaggcgcaggacgcgagcatgcacagccagcacgtcagccaggcg
gatgggaacttgtcgcaggcggtcaatgacgcggacgcctacttcaacagcatcgggccg
cagcagatggcggccatgcggatcgaccagggcgacgtgtttggtgagacgacaggatac
gagaccgggtacgtggtgaaccagcatgcgcctcagcaggtggtgcagccggcgcagggg
agcaacggggatcttttggttctgtga
DBGET
integrated database retrieval system
