Colletotrichum higginsianum: CH63R_04947
Help
Entry
CH63R_04947 CDS
T08176
Name
(RefSeq) DNA polymerase subunit Cdc27
KO
K03504
DNA polymerase delta subunit 3
Organism
chig
Colletotrichum higginsianum
Pathway
chig03030
DNA replication
chig03410
Base excision repair
chig03420
Nucleotide excision repair
chig03430
Mismatch repair
chig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH63R_04947
03410 Base excision repair
CH63R_04947
03420 Nucleotide excision repair
CH63R_04947
03430 Mismatch repair
CH63R_04947
03440 Homologous recombination
CH63R_04947
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chig01009
]
CH63R_04947
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_04947
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_04947
Protein phosphatases and associated proteins [BR:
chig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CH63R_04947
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CH63R_04947
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CH63R_04947
MMR (mismatch excision repair)
DNA polymerase delta complex
CH63R_04947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
28864029
NCBI-ProteinID:
XP_018161168
UniProt:
H1V5T4
LinkDB
All DBs
Position
3:complement(4692137..4693702)
Genome browser
AA seq
429 aa
AA seq
DB search
MDEFKKYLADQILSEEKIVTYRSLSRALKVHVNTAKGMLYEFHRSQNGMRPGTVHATYLI
YGIQKAEKVQEDGDIEMTSSPPDVVPLSDEVLTRSLTLVPGDRLKEILASYEELLSFHIY
SLARHPTRELQMLADVSQQIKEQSTEDSASMAETYGTIINPNVRKRDRQGRPVPAPAHAA
TATKPVKKESAPSTVKSAASVPKTEEPAEKEIKVPAKDAPSPAAATIKKGAAPPSLKKSG
SSGIMSSFAKAAAKASSKPKETPKPESPAALSDDGEDDDDDIPAAKSSGNTGRKSRKDRE
AELKQMMEESEEEEEPEEEEEEPADEPMEEAPEPEAKPEPEPAEVVSSTGDGRRRGKRRV
MKKKQIMDDQGYLVTIQEPAWEEFSEDEAPPPPAKAKSSSAPSSGSQTSKGKKAAPKGQG
NIMSFFSKK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattcaagaagtacctggcggatcagatccttagtgaggagaagattgtcaca
tatcgaagcctcagcagagcactcaaagtgcatgttaatacagcaaagggaatgctctat
gagttccataggtcacagaatggcatgcgtcctggcacagttcatgccacctacctgatt
tatggcatccagaaggcagagaaagtacaggaggatggcgacattgagatgactagctct
cctcctgatgttgtgcctttgtctgatgaggtcttgacccgttccttgaccttggtgccc
ggagatcgtctgaaggaaattttggcatcatacgaagagctcttgtcgttccacatctat
agcttggccagacatcctacaagagagttgcaaatgctagcagacgtctcacagcaaatc
aaggaacagtcaactgaagacagcgcatccatggcagagacatatggcaccatcatcaat
cccaatgttcgaaagcgcgaccgtcaggggcggccagtccccgctcctgcacatgcggca
acagcgaccaaacctgtcaagaaggagtccgcaccatctacagtcaagtcagcggcttct
gtgcccaagacagaagagccggccgagaaagagattaaggtacctgccaaggatgcgccg
tcccccgccgcggccactattaagaagggcgcggcaccgccctcattgaaaaaaagcggc
tcgtcgggcatcatgtcatcattcgccaaggctgcggcgaaggcttcaagcaaaccgaag
gagacgccgaaaccagaaagtccggctgctctgtctgacgatggcgaagatgacgacgat
gacatcccggctgccaaatcttcgggtaacactgggcgaaagtcgcgaaaggatcgcgag
gccgagctgaagcagatgatggaggagagcgaggaagaggaagagcccgaagaggaagag
gaagagcctgcggacgagccgatggaggaggctccggagccagaagcgaagcccgagcct
gagcccgcggaagtcgtttctagcaccggcgacggtcgcaggcgcggcaagcgaagagtc
atgaagaagaagcagatcatggatgatcagggctatttggtcacgattcaagagcccgct
tgggaagagttttctgaggacgaggctcctccgccaccggctaaggctaaatcttcgtct
gcgcctagttcgggaagccaaacttcgaaagggaagaaggcggcacccaagggacagggt
aacatcatgtctttcttctcgaagaagtaa
DBGET
integrated database retrieval system