Colletotrichum higginsianum: CH63R_05200
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Entry
CH63R_05200 CDS
T08176
Name
(RefSeq) Nucleoporin NUP49/NSP49
KO
K14307
nucleoporin p58/p45
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_05200
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_05200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Nup49_C
Prominin
Sec10_N
SAM_Exu
Motif
Other DBs
NCBI-GeneID:
28864282
NCBI-ProteinID:
XP_018161421
UniProt:
H1VB18
LinkDB
All DBs
Position
3
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AA seq
447 aa
AA seq
DB search
MFGRSASATGGGLSINTGAANAGASTSAAGGGLFGNATASTQPATSGGLFGGTQTGGGGL
FGNKPSTPATGGLFGSAQQQQQQPQQQQSGGLFGSAQPQQQQQQGGGLFGSAQPQQQQPQ
QQQSGGLFGASQQKPATGGLFGQSTSQPQQQQQQQQPSGGLFGGGNTQPQQNQGTGGGLF
GQSQAKPGGLFGQSQAANSSAPGLTMGQSTTQQTVPGVRVDISNIKGTTRFNDLEQSIQS
EMENCDMMIQRFMAHASEIRGFMAAHGGDLGQLTTDVNWLQRKYEGVKTTLDEDIVTLAH
LKDLVKSDADIAKMAFAGADQLKLPAHYHQTWLTRGGSGGNTTNGSPDRNVEDVLTLFSN
EADRLKELHQFQVQKIKEMEQHMPGVEHGLYERVRALRDQTQVPAFNMVLDLLETIKMMG
DKIYEAAGAIVDVREKLSQLQRQYPTK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacgctcagcaagcgccaccggcggtggtttaagcatcaacaccggtgccgcc
aatgctggtgcttctacgtccgcagcaggcggcggactctttggaaatgcgacggcctcg
acacagcccgctacgagcggcggtctcttcggcggtactcagacgggcggaggaggactt
tttggcaacaagccatcaacaccagcgaccggcggtctctttggctcagctcagcaacag
caacagcagccccagcaacagcaaagcggaggactctttggctcggctcagcctcagcaa
cagcaacagcagggcggaggactctttggttcggcccagcctcagcaacaacagccccag
cagcagcagagcgggggtttgtttggcgcatcccagcagaagccggccactggtggtctc
tttggtcagagtacgtcgcagccgcaacagcagcagcagcagcagcagccgtctggagga
ctttttggcggcggaaacacacagccccagcagaaccaaggtaccggcggcgggctcttt
ggccagagccaggctaagccgggtggtctcttcggccagtcccaagcagccaacagctcg
gcccccggcctgacaatgggccaatcgacaactcaacaaaccgtccccggcgtgcgggtg
gacatatccaacatcaaaggaacgacgcggttcaatgacctcgaacagtcaatccagtcc
gagatggagaactgcgacatgatgatccagcggttcatggcacacgcgtcagagattcgg
ggtttcatggcagcccacggcggtgaccttggccagcttacgacggacgtgaactggctg
cagcgcaagtacgagggcgtcaagacgacactggacgaggacattgtcacgctggcgcac
ctcaaggacttggttaagtcggacgccgacattgccaagatggcgttcgccggcgccgat
cagctcaagctgccggcgcactaccaccagacgtggcttactaggggcggctcgggggga
aacacgacgaacggcagcccggaccgcaacgtcgaggatgtgctcacgctcttctcgaac
gaggcggaccgccttaaggaactgcaccagttccaggtgcagaagatcaaggagatggag
cagcacatgccgggcgtcgagcacggcctttacgagcgcgtgcgggcgctgagggaccag
acgcaggtgccggccttcaacatggtgctcgacctgctggagacgatcaagatgatgggc
gacaagatttacgaggcagcgggcgccattgtcgacgtgcgcgagaagctcagccagctc
cagcgtcagtacccgaccaaatga
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