Colletotrichum higginsianum: CH63R_05604
Help
Entry
CH63R_05604 CDS
T08176
Name
(RefSeq) glycosyl hydrolase family 28
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Module
chig_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_05604
Enzymes [BR:
chig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CH63R_05604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
DUF1157
AUDH_beta_propeller
Motif
Other DBs
NCBI-GeneID:
28864686
NCBI-ProteinID:
XP_018158429
UniProt:
A0A1B7YD27
LinkDB
All DBs
Position
4:916151..917524
Genome browser
AA seq
457 aa
AA seq
DB search
MRGLAVFASLGTSLALGLDVPRSSVDTRVAVADPNIPSPSAWAERAGREGRRLCILEPDA
DGGDDAPALLAALNDRCRTRSIVVLPGPVYHIKSPMVTTELDDVVIDQRGKLLWSNDTSY
WLSVSMPVGFQNQSTVWHFGGDRVVWEGHGVGTLDGNGQVWYDLNKGGSNMPRRPMNINF
RGLSNSVVRGLRFVQSQMWTMNIMHSENLVLEDMYVNSTSSTENNSLNTDGADTMYSDNI
TFRRWVVANGDDAIAVKANSSNIRVYDSEFFGSTGIAVGSIGQFAGQFEYIENVFARNVT
LHDTLRACYFKTWTGVQIGYPPNGGGGGTGYARNVVLEDVTLDGARGEPLFITQCESYSG
HAGESCDTSTFAISDVVWKGFRGTVADGVASAGFFRCSAAAGGCGNLTVEDFAVKPVGRD
GDGVLDTWLCENVHGGGGFACREIEDADTDTGTEEEL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcttggcagtcttcgcgtcgctaggcacaagcctcgccctcggactggacgtc
cctcggtcctctgtcgacacgcgtgtcgcggtggcggatccgaacatcccgagccccagc
gcctgggccgagagagcagggagggagggccggaggttgtgcattctcgagccggacgcc
gacggcggggacgatgcgccggcgctgctcgccgcgctgaacgacaggtgccggaccagg
agcatcgtcgtgctgccgggtccggtctaccacatcaagtcgcccatggtgaccaccgag
ctggacgacgtggtcatcgaccagcgcggcaagttgctctggagcaacgacaccagctac
tggctctccgtgtcgatgcccgtggggttccagaaccagagcacggtctggcactttggc
ggcgaccgcgtggtgtgggaaggccacggggtcgggactctggacggcaacggtcaggtg
tggtacgacctgaacaaggggggatccaacatgccccggcggccgatgaacatcaacttc
cggggcctctcgaactcggtcgtcagggggctccggttcgtccaaagccagatgtggacg
atgaacatcatgcactcggagaacctcgtgctcgaggacatgtacgtgaacagcacatcc
tccacggagaacaactcgctcaacacggacggcgcggacacgatgtactcggacaacatc
accttccggcggtgggtcgtggcgaacggggacgacgcgatcgccgtcaaggccaactcg
agcaacatccgcgtctacgacagcgagttcttcggcagcaccggcatcgccgtggggtcc
atcgggcagttcgccggccagttcgagtacatcgagaacgtcttcgcgcggaacgtgacg
ctgcacgacacgctgcgggcgtgctacttcaagacgtggacgggcgtgcagatcggctac
ccgcccaacggcggcggcggcggcacggggtacgcgcgcaacgtcgtgctggaggacgtg
acgctcgacggcgcgcgcggggagccgctcttcatcacgcagtgcgagtcctactccggg
cacgcgggcgagtcgtgcgacacgtcgacgttcgccatctcggacgtcgtctggaagggg
ttcaggggcaccgtcgcggacggcgtggccagcgcggggttcttccggtgcagcgcggcg
gcgggcgggtgcggcaacctgacggtcgaggactttgccgtgaagcccgtcggccgggac
ggggacggggtgctggatacgtggctctgcgagaacgtccacggaggcggagggttcgcg
tgtcgggagatcgaagacgctgacactgacactggtacggaggaggagctctga
DBGET
integrated database retrieval system