Colletotrichum higginsianum: CH63R_05712
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Entry
CH63R_05712 CDS
T08176
Name
(RefSeq) WD repeat domain-containing protein
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
chig
Colletotrichum higginsianum
Pathway
chig04111
Cell cycle - yeast
chig04113
Meiosis - yeast
chig04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CH63R_05712
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
CH63R_05712
04113 Meiosis - yeast
CH63R_05712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chig04121
]
CH63R_05712
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_05712
Ubiquitin system [BR:
chig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
CH63R_05712
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
CH63R_05712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
28864794
NCBI-ProteinID:
XP_018158537
UniProt:
H1VCI0
LinkDB
All DBs
Position
4:complement(1330320..1332203)
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AA seq
602 aa
AA seq
DB search
MATASVSTPIKSHKGLFSSRTAGGRMPLTPSPRQHSATSVSVNLNSSPFTPEKQSSNEAY
RAPGKSSYSSNLTAHLARSTTSKSSHRDSPKSNIARGVATPRRALELGVSDFSLTSVGTS
KTPSSAKSKKSSLRQKTAKTTVNYGGDRFIPNRSASSAISNAGSSKLDRPDKRSKVSSSE
ASNILSSATEDAIAALEGLNIDDDEPAAYSRPSPNTVAYQDSLASACGVSLNTRILQFKP
APPESSKPIDLRQQYNRPLKPASSTSAQFRRRVATAPERVLDAPGLIDDYYLNLLDWSSG
NQVAIGLERNVYVWSADEGSVSCLLETSPDTYVSSVKWSGDGAYVGVGLGTGEVQIWDVA
EAQKVRSMFGHDTRVGVMGWNKHLLSTGARSGLVFNHDVRIAEHKVAELVSHTSEVCGLE
WRSDGAQLATGGNDNLVSIWDARSLSVPKFTKTNHKAAVKALAWCPWNMNLLATGGGSYD
RHIHFWNSTSGARVNSIDTGSQVTSLRWSPHYREIVSSSGFPDNSLSIWSYPTLVRNVEI
PAHESRVLHSCLSPDGQMLATAAADESLKFWKVFEKKAGASAGVGSSTSSVKADMVKQMT
IR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcatcagtgtcaacacccatcaaatcccacaagggtcttttctcctcccgt
accgctggcggacggatgcctctgaccccttcccctcgtcagcattcggccacctccgtt
tcagtaaacttgaactcctccccgttcacccctgaaaagcagtcgagcaacgaggcctac
cgcgcacctggcaagtcttcttacagcagcaatctcaccgcacacctggccagatcgacc
acatccaagtcgtcccaccgcgactcgcccaagtccaatattgccagaggtgtcgccact
ccccgcagagctctcgagcttggcgtctccgactttagtctgactagtgttggtacctcc
aagactccctccagcgccaagtccaagaagagttccctcaggcaaaagacggccaagact
actgtcaattatggcggcgaccgattcatccccaaccgtagcgccagctctgccatctcc
aacgccggcagcagcaagcttgaccgtcccgacaagcgttccaaggttagctctagcgaa
gcctccaacatcctctcgtcggccactgaggacgctattgctgcccttgaaggcctgaat
atcgacgatgatgagcccgctgcctactcccggccttctccgaatacagtagcctaccag
gactctctcgcaagcgcttgcggcgtcagcctcaacacccgtatccttcagttcaagccc
gcaccccccgagtcttctaagcccatagaccttcgccagcagtacaaccgtcccttgaag
cctgccagttccacttcggcacagtttcgccgacgcgtcgctactgcgcctgagcgtgtt
ctcgatgctcctgggctgattgacgactactacctcaacctgcttgactggagctctggc
aaccaggtggcaatcggtctggagcgcaacgtctatgtctggtctgccgacgagggaagc
gttagctgcctcctcgagaccagccctgacacgtacgtcagcagtgtcaagtggtccggt
gatggtgcttacgtcggtgtcggcctaggcaccggcgaggttcagatctgggacgtcgcc
gaggcacagaaggttcgcagcatgtttggtcacgacacccgcgtcggcgtcatgggctgg
aacaagcaccttctgtccaccggtgcccgtagtggacttgtcttcaaccatgacgtccgc
attgcggaacacaaggtggcagagctggtctcgcacacctccgaggtctgtggccttgaa
tggcgatccgacggcgcccagcttgctactggaggcaacgacaaccttgtctccatctgg
gacgctcgctccttatctgttcccaagttcaccaagaccaaccacaaggccgctgtcaag
gccctcgcctggtgtccctggaacatgaacctcctggcaacgggtggtggctcgtatgat
cgtcacatccacttctggaactctacttcgggcgctcgtgtcaacagcatcgacaccggc
tcgcaggtcactagccttcgctggagccctcactaccgcgagattgtcagctccagtggc
ttccccgacaactctctgagcatctggagctaccctaccctggtccgcaacgtggagatc
cctgcgcacgagagcagagtcctgcacagctgcctcagccccgacggacagatgcttgcc
actgcagccgccgatgagagtctgaagttctggaaggtcttcgagaagaaggcaggggct
agcgccggtgttggcagcagcacttcgtcggtaaaggcggacatggtgaagcagatgacg
atccggtaa
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