Colletotrichum higginsianum: CH63R_05730
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Entry
CH63R_05730 CDS
T08176
Name
(RefSeq) RNA recognition domain-containing protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_05730
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
Other 90S particles
CH63R_05730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
RRM_11
Smg4_UPF3
RRM_YTH1
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
28864812
NCBI-ProteinID:
XP_018158555
UniProt:
H1V5Y4
LinkDB
All DBs
Position
4
Genome browser
AA seq
856 aa
AA seq
DB search
MSATTAAPTTSMETSRIFVRGLPPKITEADFRQHFSAGGREVTDVKVIPLRRIGYVGYKT
PEVAAKAVKYFNRSYIRMSRINVELARPIADPAPQHTNGSTGQTYVATSSGSAAPQPSSI
EEKDAKKKRKREDLDESDPKLREFLQVMGPSKNAANEMSDVMDPVAVKEQKKLLQDGESD
DEYEAIPSRPEKRQMREAPKGEQRTEPMPEKDEAMSDAAPAPESMEDVPQEQASAAPINT
VTTDDDWLRSRTNRLLDLVDVGEAVQPPVQQNSGETAGSASAGQREVSAEVTELPKAETK
GGTMVDNALAPIESVEENGTLATIKRSSRLFVRNLPFSANEEDLRAHFEHYGELQEVHLP
VTVGGASKGFAMVQFTNAESAVAAFQSTDGQTFQGRLLHVLPAEVKRDAGLDEFAISKLP
LKKQNLIRKKAEAASSTFNWNSLYMSQDAVNASVANRLGVSKSELLDPTSADAGVKQAIA
ETSIIQETKAYFVSNGVDLDAFKSQKRGDTTILVKNFPFGTTMEELRTMFEEHGTVLRVL
MPPSGTIAIIDFAQPAHAKAAFAKLAYRRIKDTVLFLEKAPRDLFKNDASVSMTQGKEDR
PAGVQKLSVTELLGRDEQGETDVVTTSLFVRNLNFSTTTEKLAETFKPLDGFVSARVKTK
MDPKKPGQVLSMGFGFVVFKTKEQAQAALQAMDGFVLEGHTLAVKASHKGQDAAEERRRE
DKARKAAGQRTKIVIKNLPFEVTKKDIRTLFGTYGQLRAVRLPKKFGNTTRGFAFAEFVA
PREAENALNALRDTHLLGRRLVLDYAEAEAVDAEEEIAKMQRKIGGQVNKVAISQLMGQN
RKRVNIGGDNVDEMDM
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgactactgctgctcctactacatcaatggagacctcccgcattttcgtgaga
gggctcccgccgaagattaccgaggccgactttcgacagcacttctcggctggaggtcgg
gaggtgacggacgtcaaggtcatccccctgagaagaattggttatgttggatacaagacc
cccgaagttgctgccaaggcggtcaaatacttcaacagatcctacatccgcatgtcgagg
attaatgtcgaactcgcaaggccgattgctgatcccgccccccagcacacaaatgggagt
accggacagacgtatgtggccacgtcatcaggctcggccgcgcctcagccgtccagtatt
gaggagaaggacgcgaagaagaaacgcaagcgagaggacttggacgagtcggacccaaag
ctccgcgagttcttgcaagtcatgggacctagcaagaacgcagcgaatgagatgtcggat
gtcatggatcctgttgctgtcaaggagcagaaaaagctgcttcaagatggcgagagtgac
gatgagtatgaggccattccgtctcggcctgagaaacggcagatgagggaggcgccaaag
ggagagcagcgtacggagcccatgccagaaaaggacgaggctatgtctgacgctgctccg
gcccctgagtccatggaagatgtgcctcaggaacaagcctctgctgctcccatcaacacg
gtcacaacagatgacgattggcttcgttcaaggacgaaccggttgttggacctggtggat
gtcggtgaggcggtccagcctcctgtccaacaaaacagcggagagacagccggaagtgca
tccgcgggacaacgagaggtatccgcggaggtaaccgagctacctaaggctgagaccaag
ggcggaaccatggtcgataacgccttggcccctattgagagcgttgaggaaaacggcacc
ctcgccaccatcaaaagaagctccaggctgttcgtgcgaaacctacccttcagtgccaac
gaggaggatctgcgggcgcactttgaacattacggagaacttcaagaggtacacttgcca
gtcactgtcggaggcgcaagcaagggcttcgccatggtgcagttcacgaatgcagagtcg
gccgtcgccgcattccagtcgacggatggtcagaccttccaagggcgacttctgcacgtc
ttgcccgctgaggtaaagcgcgatgctgggctggacgagtttgcaatttcaaagttgccc
ttgaaaaagcagaacctgatccgcaagaaggcggaggccgcgtctagcacgttcaactgg
aattctctgtacatgagccaggacgccgtcaacgcctccgtggcaaaccggctgggtgtg
tctaaatcggagcttcttgatcccacgtcggcagacgctggtgtcaagcaggccatcgcc
gagacgtcgatcattcaggaaactaaggcgtactttgtgtcgaacggtgtggatctcgat
gcctttaagtcccagaagcggggcgacacgactattctggtcaagaatttccctttcggc
acgacgatggaggagctgagaaccatgtttgaagagcacggcaccgttctgagggtgctg
atgccacctagtggcaccattgccattatcgactttgcgcagccagcgcatgcgaaggcg
gcgttcgccaagcttgcgtataggcgcatcaaggacacagtgctgtttctcgagaaggct
cccagggaccttttcaagaatgatgcctctgtatccatgacgcagggcaaggaggatcgg
cctgccggtgttcagaagctcagtgtcacggagctattgggccgggacgagcagggcgag
actgatgtggttacgacgtcgctgttcgtaagaaatctcaacttctccacgacgacagag
aagttggcagagacgttcaaaccgttggacggcttcgtctcggcaagggtgaagaccaag
atggaccctaagaagcccggacaggtactgagtatgggattcgggttcgtcgtctttaag
accaaggaacaggcacaggcggctctccaggccatggatgggttcgtgctagagggccac
acgcttgccgtcaaggcttcgcacaagggccaggatgccgcagaggaacgcaggcgggaa
gacaaggcccgcaaggcggcggggcagcggacgaagattgtcattaagaacttgcccttc
gaagtgacaaagaaggacattcgcaccctcttcggcacctacggtcagctcagggcggtg
cgtctgcccaagaagtttggcaatacgacgagaggttttgcctttgccgagtttgtcgca
cccagggaggcggaaaacgcactcaacgcgttgcgagacacccacttgctaggccgcagg
ctggttctagactacgcagaggccgaggcggtcgacgcagaggaggagattgccaagatg
cagcgcaagatcggtgggcaggtcaacaaggtcgccatctcgcagctcatgggccagaac
aggaagcgggtgaacattggaggcgacaacgttgacgagatggacatgtga
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