Colletotrichum higginsianum: CH63R_05739
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Entry
CH63R_05739 CDS
T08176
Name
(RefSeq) vacuolar assembly/sorting protein VPS8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
chig
Colletotrichum higginsianum
Pathway
chig04138
Autophagy - yeast
chig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CH63R_05739
04148 Efferocytosis
CH63R_05739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_05739
Membrane trafficking [BR:
chig04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CH63R_05739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
Beta-prop_HPS5
Beta-prop_EML
zf-RING_Vps41
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_5
zf_RING_Vps8
zf-RING_11
zf-RING_UBOX
PHD_NSD
zf-RING_2
Beta-prop_WDR3_1st
zf-C3H2C3
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
28864821
NCBI-ProteinID:
XP_018158564
UniProt:
A0A1B7YDD8
LinkDB
All DBs
Position
4:<1431686..>1436554
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AA seq
1613 aa
AA seq
DB search
MADQDDTSSLGIPASSDEENMMAEREEDGTASLLDDEVQTSSSTPPAIGNGAVSNRYREI
LREQAEDASDEGSADAVPKRAGSPVDSLMSVPDDSPSIQASLVLNFRGSVISSPSSSILP
SVASRPGLSSPSPSFRPFDRRFQSRISSSFIHSPRSSSPAFLTGHSRSASLSSGLLDGDD
TDTPSPPWEVVRWTRLKKLNGQAFSEAGKRNFGTPTCIAVSASIVLGTSKGIILMFDYNQ
VLKTIIGPGTKAVESGAITAIAVSADHTTIAGGHANGSIFTWEANRASRPFLHIPHLDQA
QLQTRTMDGHLPSVAVTHLGFLGTRHTALVSADDRGMAFSHLATRGTGSLGRTVKTTRIL
GRYPDAAPPTGKPLKPSTVLAFSPLPLGNTERATDTMGLTAMLTPYLLVIVSTTPVAQTQ
HKSARPKDVAHHSAMTGCLAWFPAVKLKVPDPVTGSDISKVKLVYCWSNVLTVLDVDEIP
AENKDKPPGLKFKARSRWKCEEAIVAVQWLSRSVLTVLTITQRLIVLEDRTMRMTEGFDL
MNKFIYHADLFSKQLHNLVEQLDEDDTSMHGVVADAFYMSFKTYKGKIFLLGFNDVSIGS
LSNWADRIIALMENGDYVGAIQLGTSYYTGDADKLTIGLPEDTGLRHSMVRDKLMEIMRA
SLKYAFTQRQKDKSAADDGHLRELAEICFTASVSVGDVDFLFEEMYEWYEDAGLEGIFFE
TMEPYILEKQITTVPPAVVKTTVTHYVTKGWESRLEEMIVHMETTTLDLDQITVLCKQHS
LYDALIYVWNQALDDYITPLIDLLTLLVPLMSNGDYMSSGNMEDEIYGVNALKMFPYLSY
TLTGRVYPTGEVMDDAVASKAKAEIYWFLFSGNSVTWPKGSDRRFLTRPDQHNEPSFPYL
RLILKFDAPSFLSAVNEAFEDSFLNDSPEKQVNGGIRGDVPEEQIFGRTVDRQYIVSILL
EIMNPSDFAAEDTIYLDMFIARNLPKFPQYLLFPGSTLTKVLTGLCNYPGADLAEDAQLS
AEYLLSIYQPPDANTLIPMFKKAGFYRILKRQYKVDKQYGKLVQTYFEDPADRDAVFECI
GDCLRPQSGLNRRQVQEVLDAIKNNARTLLETSPLEAAKALSAQPVDVHQHVLDAAKDSP
GLQFFYLRALLEPEKRDGESPTNPDRELIERYVQFMCRYDPSHVSDYIGLVQSINLRLDA
LLPAMEETGVIDAAVVLMAREGQINDAMDRLVKHLGTLESAFLGILTGAQKNDSDGLQSG
AEETLRALQKYVHVGIWLCQGQTKSSRKANGVQRKSKSTTETLSPDEELWLNLIDAAVQT
TRQLSTAIETLDNTRNGITTDETHDALDGLEKEKLLVLLRSLVQHTFTALLTTTSSPVGA
QAGGRLLTNAGSNLSFLRILRAFLARAAASSPNLADLRSVLASIFSAYSYEESILRLSNR
LLERSLFVNVKQAVELRQRGWRPRGSTCEACGHRVWGPGVSGNVFEAWEEKQARDEEQKA
ERKSQIAAGGKGKAGSSSDVSQTAGDSKGKGKAAPVASEPLAEGDSTTAENGAVDPDVAV
AKPREQPLGPLVVLACRHIYHQSCLDAYQARPDVERKSRVETHAREYRCPIDG
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaagacgacacgtcctctctgggcatcccagcttccagcgatgaggagaac
atgatggctgagagggaggaagacggcaccgccagcctcctggacgacgaggtccagaca
tccagcagtacgccaccagcaatcggtaatggtgcagtttccaatcgataccgtgaaata
ttgcgcgagcaagccgaagatgcctccgacgagggctcggcggatgcagtcccgaagcgg
gcggggagcccggtcgattccctgatgtcggttcccgatgattccccctccatccaggcg
agtttagtccttaacttcaggggctccgtaatatcctccccgagtagcagcatcttaccg
tctgtggcctcgcgaccaggccttagcagtcccagtccctcattccgacccttcgaccgg
cgcttccagtcccgcatttcctcaagcttcatccacagccctcgatcctcctcccctgcc
ttccttaccggtcatagtcgatccgcgtctctcagttcgggccttctggacggcgacgat
accgacacgccttctccgccatgggaagtcgtacgatggacgaggttgaagaaactcaac
ggccaggccttctcggaggccggcaagcgtaacttcggaacacccacctgcattgctgtc
tctgcctcgattgtgctggggaccagcaagggtataatattaatgtttgattacaatcag
gtcctgaagaccatcatcggccccgggaccaaggcggtcgagtctggcgccattacggca
attgcggtttctgcagatcacaccacaattgctggcggccacgcgaacggaagcattttc
acttgggaggcgaaccgggcgtcgcgaccatttttacacatcccgcacttggaccaagcg
cagctccagacccggaccatggatggccaccttcccagcgtcgccgttacccatcttggg
tttctcggcactagacatacggcgcttgtttcggcggatgaccggggtatggctttctcc
catttggctacgagaggaacaggatcccttggccggactgtgaaaaccacaagaatactt
gggaggtacccggatgccgcgcctccaacgggcaagcctctcaagcccagtacggtcttg
gcatttagtcctttgcccctcggcaacacggagcgcgcaactgacactatgggcctcacg
gctatgttgaccccttacctgttggtcatcgtatccacgacgcccgtcgcccagacccag
cacaagtcggccaggccgaaggacgttgctcaccacagcgcgatgactggttgcttggca
tggttccccgcggtcaagctcaaggtcccagatcccgttacgggaagcgacatttccaaa
gtcaaattggtgtactgctggtccaatgtgctgaccgttctcgacgttgacgagataccg
gccgagaacaaggacaaacccccagggctcaaattcaaagctcggagtcggtggaagtgc
gaagaggccatcgtcgccgtccagtggctaagccgctcggtgcttactgtgctgaccatc
acgcagcggttgattgtgctcgaagatcgaaccatgcgtatgaccgagggtttcgatctg
atgaacaagttcatctaccacgccgacctcttctcgaaacaattgcataacttggtggag
cagctcgacgaagacgacacgtctatgcatggtgtcgtggctgacgcattttacatgagc
ttcaagacctacaagggcaaaatcttcctcctcgggtttaacgacgtctcgatcgggtca
ttatcgaactgggccgaccgcattattgctcttatggagaacggcgattacgtgggagcc
atacagctcggaacatcgtactacactggtgacgccgataagcttaccattggcttgcct
gaagataccggattgcggcattcaatggtacgtgacaaactcatggagatcatgagggcg
tcactcaagtacgctttcacccagcggcagaaggacaaatctgctgccgacgacggccat
ctgcgggaactagccgagatctgctttactgcctctgtcagcgtgggtgacgtcgatttc
ctctttgaagagatgtatgagtggtacgaagatgctggcttggaaggcatctttttcgaa
accatggagccttacatccttgagaagcaaatcactaccgtccctccggctgttgtcaaa
actactgtgacacactatgtcaccaaagggtgggagagccgcctcgaggagatgattgtt
cacatggagactacgactctggacctggatcaaatcaccgtgttgtgcaagcagcacagc
ctttacgatgcgctcatttacgtctggaaccaggcactagacgactacatcacgccactg
atcgacctcttaaccttgctggtacccctcatgagcaatggcgactacatgtcttccggg
aacatggaagacgagatatatggcgtgaacgccttgaagatgttcccctacctctcgtat
actttgacgggcagagtataccctaccggcgaagtcatggacgatgcagttgcctcgaaa
gctaaagctgagatttactggtttctattttcaggaaatagtgtcacatggccaaagggc
agcgaccgccgatttcttacacggccggaccagcacaatgagccttccttcccgtatctc
agactgattttgaagttcgacgccccgagcttcctcagcgctgtcaatgaggcctttgag
gattcttttctgaacgactcgccggagaagcaggtcaacggcggcatcaggggcgatgtg
cccgaagagcaaatctttggtcgcaccgttgatcgtcaatacatcgtctccattcttctg
gagatcatgaacccctcagacttcgccgccgaagacacgatctacctcgacatgttcatc
gctcgcaaccttcccaaatttcctcaatacttgctattccccggatcaacccttacaaag
gtcttgacgggactgtgcaattaccccggagcagaccttgccgaagacgcgcagctcagc
gccgagtatctgctatcaatataccagccgcctgacgccaacacgctgattcccatgttc
aaaaaggctgggttctatcggattctgaagaggcaatacaaggttgacaaacagtatggc
aaacttgtccagacttatttcgaagaccccgctgaccgggacgccgtctttgaatgcatc
ggggattgtctacgaccacagagtggtctgaaccgtcgtcaggttcaagaagtcctagac
gcaatcaagaacaacgccaggacgcttctcgaaacgagtcctctcgaggccgcgaaagcc
ctgtcagcccagccagttgacgttcatcagcatgttctggatgccgccaaggattcaccc
ggccttcagttcttctacctgagagcattgctcgagcccgaaaagcgagacggagaatct
ccaacgaaccctgaccgagaactcatcgagcgctacgtgcagttcatgtgccggtacgac
ccgtctcatgtgtccgactacattggtttggttcagtctatcaatctcaggctcgatgcc
ttgcttccagccatggaggagaccggtgtcattgatgccgcagttgtcctcatggcgcgc
gaaggccagatcaatgatgccatggacaggcttgtaaagcaccttggcactctcgagtca
gcctttttaggaattttgactggcgctcaaaagaacgactccgacgggttgcagtcagga
gcggaagagacgctacgtgccctgcaaaagtacgtccatgtgggtatctggctctgtcaa
ggccagaccaagtcatcaagaaaggcgaacggcgtccagagaaagtccaagtcgaccaca
gagacgctgtcgccggacgaggagctctggctcaacctgatcgatgcggcggtgcaaacg
acgcggcaactttcaaccgccatcgagacattggacaatactcgaaatggcataacaacg
gacgagacccacgacgcgctggatggtctagaaaaggagaagctcttggtccttttgcgg
tccctagtgcagcacacgttcacggctctcctgacaacaacctccagccctgtaggagct
caggcgggtggtcgactgcttaccaatgctgggagcaatctttcttttcttcgcatcctg
cgagcgttccttgcccgagccgcagcctcctcgccaaacctagcagatctgcgttctgtc
ctggcctcgatcttctcggcgtactcctatgaggaatcgatacttcggctgtccaaccga
ctgcttgagcgaagtttattcgtcaacgtgaagcaggccgtggagcttcgtcaacggggt
tggcgacctaggggctctacatgcgaggcttgcggtcatcgggtctggggtccgggtgtc
tcaggcaatgtctttgaggcttgggaggagaagcaagcacgtgacgaagagcaaaaggcg
gagagaaaatcccaaatagccgcaggaggcaagggcaaggccggaagctcgagcgatgtt
tctcaaaccgcaggggattcgaaaggcaaaggcaaggcggcgcctgtggcgtcagagccc
cttgcggagggagacagtacaacggcggagaatggcgcagtagaccctgatgttgcagtc
gcgaagccgcgagagcagccgctgggaccgttggtcgtgctcgcatgcaggcacatttac
caccagagctgcttggacgcctaccaggcccgaccggacgttgaaaggaagagccgagtg
gagacgcacgcgagggagtataggtgtccgattgatggatag
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