Colletotrichum higginsianum: CH63R_05780
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Entry
CH63R_05780 CDS
T08176
Name
(RefSeq) Transcription elongation factor S-II
KO
K03145
transcription elongation factor S-II
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_05780
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CH63R_05780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
28864862
NCBI-ProteinID:
XP_018158605
UniProt:
H1VXG0
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All DBs
Position
4:complement(1583702..1584783)
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AA seq
302 aa
AA seq
DB search
MSTGMDQRELESCIKQLNKIVQANEPPATALALLERLKKEAAPTEEMLRSSRAGVFVGKL
RSNSNKEIARAATELVHKWKKLVEAEKQGKIKKQSSPAAPSPTQAPAPKPSSSNAMNQPF
KGNPELRRAKSDGCDTKRTGDETRDSCIELIYNGLAYRSTASVTDVLAKAVAVEHAAFSH
YKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKIAPERFVVMTHEELKSEEQRKKEDA
LQLENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggcatggatcaacgtgagcttgagtcatgcatcaagcagctcaacaagatc
gtccaggcaaacgagcctcctgcgaccgccttagcactccttgagcgtctgaagaaggag
gctgctcccacggaagagatgctcaggtctagcagagctggtgtcttcgttggcaagctt
cggtcgaactcgaacaaggaaatcgcccgcgccgcgacggaactcgtccacaaatggaag
aaactcgtcgaggccgagaagcagggcaagataaagaagcagtcgtcccccgccgctccc
tccccgacccaggcccccgcaccgaagccctcttcgtcgaatgcgatgaatcagcctttc
aaaggcaatcccgagctccgtcgcgccaaatccgatggctgcgataccaagcgtaccggc
gatgaaacgcgcgactcctgtatcgagttgatctacaacggtctcgcctaccggtctact
gcctccgtcaccgatgttctcgccaaagccgttgccgtcgagcacgctgcgttcagccac
tacaagggtgtcaccaaggagtatcgtgagaagctacgctccctgtttagcaatcttaaa
gtcaagagcaaccgccagctcggtgttaatgtcatggagggcaagatcgctcctgaacgc
ttcgtcgtcatgacccacgaggagctcaagtcggaggaacagcgcaaaaaggaagacgct
cttcaacttgagaacatgaagaaggcacaggtccccatggccgagaagagcatcagcgac
gctctcaagtgcggcaagtgtggtcagaagaaggttagctacagccaggcgcagacgcgc
agcgctgatgaaccgatgacaacattctgcgagtgcactgtttgcggtaatcgctggaag
ttctcttga
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