Colletotrichum higginsianum: CH63R_05910
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Entry
CH63R_05910 CDS
T08176
Name
(RefSeq) Transcription initiation factor tfiid 127kd subunit
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
chig
Colletotrichum higginsianum
Pathway
chig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CH63R_05910
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chig01002
]
CH63R_05910
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_05910
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_05910
Peptidases and inhibitors [BR:
chig01002
]
Metallo peptidases
Family M1
CH63R_05910
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CH63R_05910
Coactivators
SAGA/TFTC/STAGA complex
CH63R_05910
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CH63R_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
28864992
NCBI-ProteinID:
XP_018158735
UniProt:
A0A1B7YEH3
LinkDB
All DBs
Position
4:complement(1999345..2004220)
Genome browser
AA seq
1605 aa
AA seq
DB search
MSAIMAPAGAPAVDEVIVSDSEDDLPPVNDEPPYPYFVLKQDVEIEVNFRSKRIQGKSHI
TLGLVSGSISQLDELAIDARQSEIDVKNITITALKDQTPISAPRKVPATYTDPYKLLDYP
DYYNWNASHHDLRKIRMRSIMHNRRHDVPAENRELVGCTPVDGALRINLREAKKMKETKE
GKEEPTSGAGVTKRPLLKIRVSSVTPNELQASELASSREIRVTIPFKTKLVRDGFQFVGV
DPGDLRYPHAYTRHSIEPGTASCIFPCIDDPGQLPTWTMAVKCPRTLGDALWQPLATQRA
NGNANNHRDRGQANQSKTDRDFALTEEDKLLEMTVVCSGSLSDEIVDPEDERKKIMTFDL
DKRVAVQKIGFAVGPFEHVDLFSDFRTEENDEKLGGSALKIHGYCLPGRAAEVHNTCAAL
AAAADFFTLTFARFPFESYKLCFLDDMADDTVALQSLSFISTRLLFPEDMIDPEVDVTRQ
LVYSLASQWSGINLFPNTRRDLWVVIGIAYYMTDLFLKKLCGNNDYRFRMKAMSDKLVTV
DVKRPSLHELGHLLHIGDFEMEFMALKAPLVLFILDKRLMKAPAQTNLTRIISRILYKAN
IGEKQSEWIINTESFQRVCEKNARNKLEAFWAQWVYGSGCPRFDVFQRFNKKRLCVEMTI
RQVQDRALSESEVLKKTEFLRAIKEKANGVQVDEAMGLFTGPMTIRIHEADGTPYEHIVE
IREDAAKAAKFEIPYNTKYKRLKRKRRATEKLSAQSAADPDNNEETLLYCLGDVLTNPED
MRKWEFSEWEPEIEKAMDQESYEWIRMDADFEWACEMKTNLQSYMYVSQLQQDRDVVAQQ
DSMLYLKKSPPHPLVSTFLTRTLVDRRYFHGIRTMAADMLYHHATEKVAMAGMTHLLKAF
TELFCYPDSATPRPNDFTDKKQYLVQSALPMAIAKIRDANGRCPEPARRLLLNQVQFNNN
ANNPYSDHFYVAKLLEAVAHSLIPEKRRDAGDSMDLDTSIEERSFLGEAIVEIDRFRRMD
EWANSYQNIWTTTALECRRKLMKAGVIPRSALDFIQYLQDDTCDLVRLKAFEALVDLGYM
MELPIFRLIVSVMSTDRSPFLRDKLLKIFCTGLASLAFGEQSRARAAPLAADSGELTVIN
NTEGETQERRKQFARKQDINVALAALRAEMEEQYAEQERPMMRAVWRALDSNVIGRAEKI
TLIELCGAMFDAADRWTITMKYPKRWAVNRPVQRQPGRNMINFKSYFKTGIPQKPKEKEP
ELPAPAAAPAPAPAAAAVTATATATAAATATASAPARPTEPKRLIVSMKSGTAKTNKPAS
PAPRPFSAVPRPSPSPAMQSPVPSAAPSPVPREADSIVAQSITKSSTPKPSVAKPSVAKP
SVAKPSPSVPKLPTAKPITTKPSVVKPGLARPGVAKPVVSSPSLQQNGRSTPQATPEPSG
TGTNNKLQKRPRPDKVPGVDDASPVLKKPKLSIRPDGTVVKKRRMFRFKHPNLRQILKKA
GVKNMGPVRDPSQLKNRKPGHSLSARASPAGSPAPLPSESINAKPARKPLPGGPSTASPS
PGPASLPPKPPPQASPPQASPPPAEGQAPKKVKLVIKKPSSSLPK
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatcatggcccctgcgggcgcccccgccgtcgacgaggtcatcgtcagcgac
tccgaggacgacctgcctcctgtgaatgacgagccaccctacccctacttcgtcctcaag
caagatgtcgagatcgaagtcaacttccgatcgaagcggatccaaggaaaatcccacatc
acgttgggcttggtatcaggctccatctctcagctcgacgagctcgccatcgatgcgcgg
caatccgaaatcgacgtcaagaacatcaccatcactgccttgaaggatcagacacccatc
agcgcgccgagaaaagtcccagccacgtacacggacccgtataagttactggattacccg
gactactacaactggaacgcctcgcatcacgatctgaggaagatccggatgcgctccatc
atgcataaccgacggcatgacgtgcctgccgagaatagagaactcgttggctgtacgccc
gttgacggtgctttgcggattaatctccgagaagcgaagaagatgaaggaaaccaaagaa
ggcaaagaagaaccgacatcaggagcgggagtgaccaagcgaccgcttctcaagatacgt
gtctcgagcgtgacaccgaatgagctccaagcaagcgagctcgctagctcacgggaaatt
cgagtcacaataccattcaagaccaaactcgtgcgggatggcttccagttcgttggagtc
gacccaggtgacctcagatacccgcacgcctatacccgccattcgatcgagccggggacg
gcatcgtgtatcttcccatgcatcgacgatcctggccagcttccgacctggacgatggcc
gtgaagtgtccgaggacgctgggtgatgcactctggcagcctttggccacgcagagagca
aacggcaatgcgaacaaccatcgggatcgtgggcaagccaaccagtccaagaccgataga
gactttgctctcaccgaggaagacaagcttctagagatgacggtggtgtgctccgggagc
ctctcggacgagattgtggaccctgaggatgaacgcaagaagatcatgacctttgacctc
gacaaacgggtcgcagtccagaagatcggctttgcggttggtccattcgagcatgtcgac
ctcttctccgacttccgtacggaggaaaacgacgagaagcttggcggaagcgcgctcaag
atacatggttactgcctccctggaagagccgcggaggtccacaacacttgtgctgcgctt
gccgctgccgccgacttttttactctgacgtttgctcgttttccgttcgaaagctacaag
ttatgctttcttgacgacatggctgacgataccgtggccttgcaatcgctttccttcatc
agcactcgtctgctgttccccgaagacatgattgatccggaagtcgacgtaacaaggcag
ctggtgtacagcttggcctcacaatggagtgggatcaatctcttcccaaacacacggaga
gatctctgggtcgtcatcggcatcgcctactacatgaccgatctgttcttgaagaagctg
tgcggcaacaacgactataggttccgcatgaaggcaatgtcggacaagttggtgacagtc
gacgttaagcggccatcattgcatgagcttggccatctcctgcacatcggagacttcgaa
atggagtttatggcactcaaggcacccttagtactcttcatcctggataaacgcctgatg
aaggcacccgcccagaccaacctcactcgcattatttcgagaattctctacaaggccaac
attggggagaaacagagcgagtggatcatcaacacggaatccttccagagagtctgtgag
aagaacgcaaggaacaagctcgaggcgttctgggctcaatgggtatacgggtctggatgt
ccgaggttcgatgttttccagaggttcaataagaaacgactgtgtgttgaaatgacgatc
cggcaagtgcaagacagggctctgagcgaatcggaagttctgaaaaagacagaattcctt
cgcgccatcaaggagaaggccaatggcgtccaagtggacgaagcaatgggtctctttacg
gggcctatgacgatcagaattcacgaagccgacggcacgccctacgaacacattgtggaa
atccgcgaggacgctgccaaggcggccaagttcgagatcccgtacaataccaagtacaag
cgactaaagaggaagaggagagcaacggagaagctcagcgcgcagtctgccgcagacccc
gataataacgaagagacactcctatactgtctgggagacgtcctgaccaacccagaagat
atgaggaagtgggaattctccgagtgggagcctgagatcgagaaggccatggaccaagag
tcgtatgagtggatccggatggacgccgacttcgagtgggcctgcgaaatgaagacgaac
ctgcagagctacatgtacgtgtcgcagttacagcaagacagggacgtcgtggcacagcag
gactcaatgttgtatctgaagaaaagcccgcctcatcctcttgtttcgacgtttctcaca
agaaccctcgtcgatcgtcgatacttccacggcatcagaactatggccgccgacatgcta
tatcatcatgctaccgaaaaggtcgccatggcaggcatgacgcatctcttaaaggccttc
acagagctcttctgctatccagactctgcgactcctcgtccgaacgacttcacggacaag
aagcagtaccttgtccagagcgcgctccccatggcaatagcgaagatccgtgacgccaac
ggcagatgtcccgagccggcccggcggctactgctgaaccaggttcaattcaacaacaat
gcgaacaatccgtactcagaccacttctacgttgcgaagcttctcgaggctgtggcccat
agcctgattccagagaaacgacgggacgcgggtgactcgatggatctcgatacatcgatt
gaggagagaagctttcttggggaggccattgtcgaaatcgaccgtttccgaaggatggac
gagtgggccaactcgtaccagaacatctggacgacgactgcactcgagtgcagacgaaag
ctcatgaaggcaggcgtcattcccagaagtgcattggacttcatccaatacctgcaggac
gacacatgcgatctcgtacggcttaaggcatttgaggctctcgtggatctcggttacatg
atggagctgcccatctttcgcctgatcgtctctgtcatgagcactgacagatctccgttc
ctgcgagacaagctcctgaaaatcttctgtacgggattggcaagccttgctttcggcgag
caatcccgggctcgggctgctcctctggccgccgacagtggcgaactcaccgtcatcaac
aataccgagggtgagacccaagagcggcgtaagcaatttgctcggaagcaagacatcaat
gttgcacttgcggctttgcgggcggagatggaggagcaatacgcagaacaggagagacct
atgatgagggcagtctggagggcccttgattccaacgtgattggccgggccgagaagatc
accctcatcgagctgtgcggcgcgatgttcgatgccgctgaccggtggacgattacaatg
aagtaccctaaacggtgggcagtcaatcgtccagttcagcgtcagccaggcaggaatatg
atcaacttcaagtcatacttcaagacgggaatccctcagaaacccaaggaaaaggagcct
gaactaccggcaccggcagcggcaccagcaccagcaccggcagcggcagcggtaacggct
acagctacggcaacggcagcagcaacagcaacagcatcggcgccagctcgaccaaccgaa
cccaagcgtctaatcgtgagcatgaagagtggcaccgccaaaaccaacaagccagcttcc
cccgctccccggcctttctccgctgtccctcgcccgtccccgtcaccggctatgcaatcc
ccagttccgtctgcggcgccatcgccagttccccgggaagcagactcgattgtggcacag
tcaatcaccaaatcgtccacgccgaagccgtccgtcgcaaagccgtccgtcgcaaagcct
tccgtcgcgaaaccgtccccgtctgtacccaagctgccgacggcgaagcccatcaccacg
aagccctcagtcgtgaagcctggactggcgaggcctggtgttgcgaaacctgttgtgtcc
tcgccatctttgcaacaaaatggacgctccactccccaggccacccctgagcccagtggc
actggtaccaacaacaagttgcagaagagacctcggccggataaggtgccgggagtcgac
gacgcatctccggttctcaagaagccgaagttgagcattcggccggacggcactgttgtt
aagaagcggaggatgtttaggtttaagcaccctaacctccggcagattctgaagaaggcc
ggcgttaagaacatgggccccgtcagagacccgtcccagctgaagaaccgcaaacccggg
cattctttgagcgcccgcgcgtctccggctgggtccccagcccctctcccgtccgagagc
attaacgccaagccagctcggaagcctctacctgggggtccgtcaacagccagtccttca
ccaggcccagcttcactgccgcccaagcctccgccgcaggcatctccaccgcaggcatct
ccaccgcctgccgagggccaggccccgaagaaggttaagcttgtcatcaagaagccgtcg
tcgtcgctgccaaagtaa
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integrated database retrieval system
