Colletotrichum higginsianum: CH63R_05931
Help
Entry
CH63R_05931 CDS
T08176
Name
(RefSeq) RNA recognition domain-containing protein
KO
K12876
RNA-binding protein 8A
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
chig03015
mRNA surveillance pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_05931
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_05931
03015 mRNA surveillance pathway
CH63R_05931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_05931
03041 Spliceosome [BR:
chig03041
]
CH63R_05931
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CH63R_05931
Spliceosome [BR:
chig03041
]
Complex C
Other components
EJC/TREX
CH63R_05931
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RecQ5
Motif
Other DBs
NCBI-GeneID:
28865013
NCBI-ProteinID:
XP_018158756
UniProt:
A0A1B7YDZ2
LinkDB
All DBs
Position
4:<2061054..>2061703
Genome browser
AA seq
184 aa
AA seq
DB search
MADVEMEVDNPPSPSAAAVGGEAAPARNESEMQTHGRATAVRSIEGWIIMVTNVHEEADE
EAIHDMFGEFGEIKNLHLNLDRRSGYVKGYALIEYATLAEARAAIDSAHETKLLDQTVYV
DFAFVRPPPGSKGGSGGGGGNRGGAGARPQNRGRGRSRSRSRSRSVDREAAAAAAVAKDS
GDIE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtggaaatggaagttgacaaccccccctccccctctgccgccgccgttgga
ggcgaggccgcccccgcccgcaacgagtctgagatgcagacacacggccgcgccactgcc
gtccgctccattgagggctggattatcatggtcaccaacgtccatgaggaggctgacgag
gaagccatccatgacatgtttggcgagttcggtgagatcaagaacttgcacctcaacctc
gaccggaggagtggttacgtaaagggctacgcacttatcgagtacgccacccttgccgag
gcccgcgccgccatcgactcggcccatgagaccaagcttctcgaccagaccgtttacgtc
gacttcgccttcgtccgccccccgcccggcagcaagggcggcagcggcggcggcggcggc
aaccgcggcggagccggtgcgagaccccagaaccgcggccgcggccggagtcgcagccgc
agccgcagccgcagtgtcgacagggaggcggcggcggccgccgccgtcgccaaggacagc
ggcgacattgaatga
DBGET
integrated database retrieval system
