Colletotrichum higginsianum: CH63R_06060
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Entry
CH63R_06060 CDS
T08176
Name
(RefSeq) Garp complex subunit vps53
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_06060
Membrane trafficking [BR:
chig04131
]
Protein recycling
Others
EARP complex
CH63R_06060
Endosome - Golgi transport
Tethering complex
GARP complex
CH63R_06060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Sec6
Syndetin_C
RINT1_TIP1
COG4_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
28865142
NCBI-ProteinID:
XP_018158885
UniProt:
H1VB45
LinkDB
All DBs
Position
4:2473346..2475680
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AA seq
760 aa
AA seq
DB search
MQSAQAELAQLFRKIETVRSRAIQTEQNITSMTADIKRLDGTKRNLTLSMTALKRLQMLT
TAYDQLRALAKSRQYRDCAGLLQAVLQLMKHFNSYRSIEQIATLSRGVSELQRELLEQVC
EDFEIAFAKAEVGQRRGTLAEACLVMDALGEMARTRLMNWYVNTELREYRQVFRGNDEAG
NLDNIGRRYAWFKRMLKTHEDEHAVIFPPHWRANELLAMAFCDGTRDDFKGILERSMRRT
DGQKIDVNLLLSCLQETLDFEHGLEKRFANEPRASIDTLSSSDDRASNFHGSISAAFEPY
LSLWVDSQDKQLASMIPKYRSQPLLPEDEEFSSQAVISSAIELFHFYKLTLSQCAKLSTS
DRLLDLSKTLAKYLDEYAQQVLLHILQRAGPQGPPIQDVILVLNTADFWSTNTTQLEENI
KKRIDNDLVGKVDLSSQADAFLGVASAAVLTLVRNVEIACEGSWREMRNTGWSTMESVGD
QSSYVGELLSSVNSKTEEILGLVVKQQYARAFCDNLVDHLVNAYISNIVQCRPVSEVGAE
QMLLDKYVLTKAFENLLSYHNKTSAAATHTAPASYVKRVNQTMNRIDPLLKTLQVRPSPP
EGLVQAYLIHIGDRSDTNFRKILDLKGVRKGDQGHLVELFGIHREGNLSDKLVQQSPLLT
PLMATTGLGSSGLGPINASNALTTASSAMPGLPSKFDATSLGEKLLSAARDLGQGTGPGG
IVGAEKATMNENLKNFGKFFRRDLGGFGARFGKRDESTDR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgcccaagccgagctagcccagctcttccgcaagatcgagacggtgcgatct
cgagcaatccagaccgagcagaacatcacctccatgacggctgatatcaagcgactcgat
ggcacgaagcggaacctgacgctgagcatgacggcgctcaaacgactacaaatgttaacg
acggcatacgaccagctgagagccctggccaagtcgagacaataccgggactgtgcaggt
ctgctgcaagctgtgctacagcttatgaagcacttcaacagctacaggagcatcgagcag
atcgctactctgagcaggggggtctcggaactgcagcgtgagttgttggaacaggtctgc
gaagactttgagatcgccttcgccaaggcagaggtcggccagcgcaggggtacgctggcc
gaggcctgtctcgtcatggatgctctgggcgaaatggcgcggacaaggttgatgaactgg
tacgtgaacacggagctccgtgagtaccgccaggtcttcaggggcaacgacgaggccggc
aatctcgacaatatcggccgcaggtatgcctggtttaagcgcatgctcaagacacacgag
gacgagcacgccgtaatcttccctcctcactggcgtgcgaatgagctattggccatggcc
ttctgcgacggcacgagggatgacttcaagggcatcctcgaaaggagcatgcggaggacc
gatgggcagaagatcgacgtcaaccttctgctgagctgcttacaggagacgttggacttt
gagcacggtctcgagaagcgattcgccaacgagccacgtgccagcattgacaccttgagc
tcttccgatgacagggcatccaacttccatggctctatatctgccgcctttgagccttac
ttgagcttatgggtggattcacaagacaagcaactcgccagcatgattccaaagtaccgc
agccagcctctgcttccggaagacgaggagttctcgtcgcaggctgtcatctcatccgcc
attgagcttttccacttctacaaactcaccctgtcgcaatgcgccaagctgtccactagc
gaccgactgctggatctttccaaaactttggccaagtacctcgacgagtatgcgcagcag
gttctcttgcacattctccaaagggcagggccccagggaccaccgattcaggacgtcatt
ttggtattgaacacggccgacttttggtctacaaacaccacgcagttggaggaaaacatt
aagaagcgtatcgacaatgacctcgttggcaaggtcgacctttcgtcgcaagccgatgca
ttccttggtgtggctagcgccgctgtgctgactctggtgcgcaatgtcgagattgcgtgc
gaaggctcgtggcgcgagatgcggaacacgggctggagcaccatggagagcgtgggagac
cagagctcttacgtcggcgagctcctgtcctccgtgaacagcaagaccgaggaaatccta
ggcctcgtggtcaagcagcagtacgcaagagcgttctgcgacaacctcgtggaccatctt
gtcaacgcctacatcagcaacatcgtccagtgccgtcctgtgtccgaggttggcgccgaa
cagatgctgctcgacaaatatgtcttgacgaaagcgttcgagaacctcctgtcctaccac
aacaagacttcggcggcggcgacgcacacggcaccggcaagctatgtcaagcgagtgaac
cagacgatgaaccgcattgatcctctcctcaagacgcttcaggttcgcccgtcgccgccg
gaaggccttgtacaagcatatctcattcacattggcgatcggtccgataccaacttccga
aagatcctcgacctcaagggcgtccgcaagggcgaccagggccatctggtagagctcttt
ggcatccaccgcgagggtaacctgagcgacaagctcgtgcaacagtccccgttgctgacg
ccgcttatggcgacgacggggctcggcagctccggcctaggacccatcaacgcgagtaat
gcgcttacaacggccagcagcgcgatgcccgggctgccgagcaagttcgacgcgacgtct
ctgggcgagaagcttctcagcgcggcccgggacctggggcaggggacaggtccagggggc
atcgtgggagcggagaaggcgaccatgaatgagaacctcaagaactttggcaagttcttc
cggagggatctcggagggttcggggcgaggtttggaaagagggatgagagcaccgatcgg
tga
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