Colletotrichum higginsianum: CH63R_06370
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Entry
CH63R_06370 CDS
T08176
Name
(RefSeq) MutS domain V
KO
K08737
DNA mismatch repair protein MSH6
Organism
chig
Colletotrichum higginsianum
Pathway
chig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CH63R_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_06370
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CH63R_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
DUF5740
AAA_27
AAA_29
AAA_21
Motif
Other DBs
NCBI-GeneID:
28865452
NCBI-ProteinID:
XP_018159195
UniProt:
A0A1B7YFV9
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Position
4:3485833..3489655
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AA seq
1216 aa
AA seq
DB search
MGERSSPAARTPAKTPSTLKRQPSSSAGTQKTIVQFFSKSANASRSTPKPVASAPDSSPC
LRESTRINTLPRACQPSSTTSVLSSDAIEPASSQENMAGKTLSGPPLPSSPTRKSKKRVN
YAEPSDDEDDDPFVRLRASSTRRRTKAPAAIVDDGDDYEDVGSNGAADEDDGWYPSSSLS
RRSLILHADMLDFIISDESDAPSQPKKRKRREPAKAAQSRKKSNVSSPIKEEQYDDDELD
EAMQDIPNTSTAQQWRYDPDNTAPAASRTAIAPTIRRLTEPKAKEKAHVREPEDRYPWLA
NIVDINKKPPGDPDHDPSTVYIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELY
ENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMR
ERDDTAAKSKKADKIIRRELACILTGGTLVDGSMLQDDLATYCASIKESTIDGKPAFGIT
FVDCATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSRISIKALRILKNNTSPMTIW
NYLKSGSEFWDADMSRRELDTSGYFVKDDGGAEAWPHALAQARDKNLLMAALGALVQYLR
MLKLETDLLSQGNFEWYTPIRRNGTLVLDGQTLINLEVFSNTVNGGPEGTLFALLNRCVT
PFGKRLFRQWVCHPLCDIMRINERLDAVDMLNTDRGVREQFTSQMTKMPDLERLISRIHA
ASCKPEDFVRVLEGFEQIEYTMGLLGSFGGGNGLVDRLLSSMPNLNDPLSYWKTAFDRKK
AKDEKILIPQRGIEEDFDNSQDRIEEIKQELQAVLGRKKAELKCKTLKFTDVGKEIYQVE
APKSVKVPSNWRQMSATSSVKRYYFEELTDLVRELQEAEETHSQIVKEVAARFFRRFDAD
YETWSQSIRIISQLDCLISLAKASSSLGEPSCRPHFVDQERSVVEFEELRHPCMLNAVAD
FIPNNVQLGGGSAKINLLTGANAAGKSTVLRMSCIAVIMAQIGCYIPATSARLTPVDRIM
SRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHH
IATHVGCVGFFATHYHSLATEFENHPEVQPRRMQIHVDEEQRRVTFLYRLEDGVAEGSFG
MHCAAMCGISSRVIERAEVAAREWEHTSRLKESLEKAKSGCYIPLGILSDVSSLLQGSDI
VGKEGVKVLLQAVETL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaggtcctcaccggctgcccgcacacctgcgaaaaccccctcgacgctcaag
cgccaaccatcttcgtctgccggaacccaaaagaccatagtccagttcttttccaagtct
gcaaatgcctcgcgctctacccccaagcccgtggcttcggcccccgattcgtccccgtgc
ttaagggagtcgacccggataaacacccttcctagagcctgccaaccttcgagcacgacc
tccgtgttgagcagcgatgccattgagcccgcgagctctcaggagaacatggccggaaag
actctcagtggaccgcctctgccctccagtccgactcgaaagtcgaagaagcgagtcaac
tacgccgagccttccgacgatgaggacgatgatcctttcgtccgtctccgagcatcaagc
acccgacgacgtaccaaggcaccggctgccattgtcgacgacggcgacgactatgaagac
gtagggagcaatggtgctgccgatgaggacgacggttggtacccttcttcaagcctctcg
agacgaagtctaatactccatgcagacatgctcgatttcatcatcagcgacgagtcggat
gcaccttcgcagccgaagaagcgcaaacgtcgtgaaccggcaaaggcagcgcagtcccga
aagaaatcgaacgtctcgtctccaatcaaggaagagcagtatgacgacgacgaacttgat
gaggccatgcaagacattccaaacacctcgacagcccaacagtggcgctacgacccggac
aacactgctccagccgcatctcgaaccgccattgccccgactatccgtcgacttaccgag
cccaaggccaaggagaaagcgcacgtgagggagccagaggatcgatatccttggcttgct
aacatcgttgacatcaacaagaaacccccgggcgacccagaccacgatccatccactgtc
tacatcccgcccatggcgtggaacaaattctctcctttcgagaagcagtactgggagatc
aagcaaaagctttgggacaccgtcgtgttcttcaagaagggcaagttctatgagctttac
gagaatgatgccaccattggacatcaactcttcgacttgaagctcactgatcgtgtcaac
atgcgtatggttggtgttccggagagctctctcgacatgtgggtgaaccagttcgtcgcc
aagggttacaaagtcgcccgggttgaccagatggagtccgcgcttggcaaagaaatgaga
gagagggatgacacagcggccaaaagcaagaaggcagacaaaatcattcgccgtgagttg
gcctgcatcctgaccggtggcactcttgtcgacgggagcatgctgcaggacgacttggct
acgtactgtgcctccatcaaggaatcgaccatcgacggcaagcccgcattcggtatcaca
tttgtggactgcgcaactggccaattttttatctcggagttcgaggatgatgttgatttg
acgaaatttgagacttttgtcgcccagaccagtccgagagagttgatcttggaaaagtcc
cgtatctcgataaaggcacttcggatcctcaagaacaacacgtcgcccatgaccatctgg
aactacctcaagtcgggcagcgagttttgggacgcagacatgagtcgccgggagctagac
accagcggttattttgtcaaagacgatggcggcgcggaagcctggccccatgcactggct
caagccagagacaagaatttgctcatggctgctcttggggctctggttcagtacctcaga
atgttgaaattggagaccgatctcttatctcaaggtaacttcgaatggtacactcccatc
cggcgcaacggtacacttgtcctggacggccagactctcatcaacttggaggttttctcc
aacactgtgaatggcgggcccgaaggcacgctgttcgctcttctcaatcgatgcgttact
cccttcggcaaacggctgttccgccagtgggtgtgccatcctctatgcgacatcatgaga
atcaatgagcgtctggatgcggttgatatgctcaacaccgacagaggcgtacgagagcag
tttacgtcccagatgaccaagatgccggatctggaacgcctcatctctaggatacacgct
gcctcgtgcaagccagaagacttcgtgcgcgttctggaagggttcgaacagattgagtac
accatgggtcttctgggttcgtttggtggcggcaatggtcttgttgaccgacttctgtct
tccatgcctaatcttaacgatcccttgtcttactggaagactgctttcgatcgcaagaag
gccaaggatgagaagatacttatccctcaacggggcatagaggaagatttcgacaacagc
caagaccgcatcgaagagatcaagcaggagctgcaggcggttcttggaaggaagaaagcc
gagttgaagtgcaagacactcaagtttaccgacgtgggcaaggagatctaccaggtcgag
gcccctaagtccgtcaaggtgccgagcaactggcggcaaatgtcggcaacttcgagtgtc
aagcggtattactttgaagaactcacagacttggtgcgcgaactgcaagaagcggaagaa
actcactcacaaatcgtgaaggaggtcgccgcacgattcttccggcgattcgatgccgac
tacgagacgtggtcgcagtccataaggatcatatcacagcttgactgtctcattagtctt
gccaaggcgtcatcgtcactgggtgaaccaagctgccgcccccatttcgtcgatcaagaa
cgcagtgttgtcgagttcgaggagctgcgccatccctgtatgctgaacgcagtcgctgat
ttcatccccaacaatgtccagctcggtggcggctctgcgaagatcaatctgctgacgggt
gccaatgccgcgggcaagtcaaccgtattacgaatgtcttgcattgccgtcattatggca
cagattgggtgctatattccagcaacatccgcccgcctcacccccgtcgaccgaatcatg
tcacgattaggagcaaatgacaacattttcgcgtctcaatcaaccttttttgtggagtta
tcggaaacaaagaagatcttatcagaggccacgcctcgatcattggtcatcctggatgag
ttggggcgtggaaccagctcttatgatggcgtagccgtggcgcaagctgttttgcatcac
attgcgacacacgtgggttgtgtaggtttctttgccacccactatcactcgctcgcaaca
gaattcgagaaccacccggaggttcaaccgcgccgcatgcaaatccacgtcgacgaggag
caacggcgtgtcacattcctttacagactggaggatggtgttgccgagggcagcttcgga
atgcactgcgcagctatgtgcggcatctccagccgtgttattgagcgtgccgaggtagca
gcaagggaatgggaacacacgagcaggctcaaggagagcttagagaaggctaaatcgggc
tgttatatcccgcttggcattctaagcgacgtgtcgtctctacttcaaggtagtgatata
gtagggaaagagggcgttaaagtgttacttcaggctgtagagacgctttag
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