Colletotrichum higginsianum: CH63R_06376 Help Entry CH63R_06376       CDS       T08176                                  Name (RefSeq) CCR4-Not complex component   KO K12604   CCR4-NOT transcription complex subunit 1 Organism chig  Colletotrichum higginsianum Pathway chig03018   RNA degradation Brite KEGG Orthology (KO) [BR:chig00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CH63R_06376  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:chig03019]     CH63R_06376 Messenger RNA biogenesis [BR:chig03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      CH63R_06376   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      CH63R_06376 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT Motif Other DBs NCBI-GeneID:  28865458 NCBI-ProteinID:  XP_018159201 UniProt:  A0A1B7YFN5 LinkDB All DBs Position 4:3561444..3568239 Genome browser AA seq 2189 aa AA seqDB search MVPQSRSGSFSPHPSQLLQTGSGHSPHTSQPAALSAGASPSTSSPTGPSPLVKIAVAQVY LLLGAIKEDKDRAKWEIQAEQLQKLIDEHGMEVFTKYFARLVAVHAAHIFHGQPRAGANG NFHLLVTEMQKISHDVHQANKIAESIETGTEDIFRDFDMSTFMEAFKLDALEKTMLALAF KMGSRSDLKTKADAILSTNFPTFVNILARRDIEEHSDLTDQFIAVLVDRFIQYQPPSFNA ASKAELAYKVQARWHGDQAPPPSEVLAALDLVRVLADKPPNALATYIQRTGVEFTRDEEI CSSHLQNRPQNVQLSEEQVSIALMYSTISQSPLYDPSILAASLRRVLPPSFRWQDVVSYL DQRSARISSQQFLRLYNSLLPIAQDDQTFDIQKLWGGNWEHPETQLSFICAFASLQPDQL DASTIPGLVPTLTLDTYAQSPPEVQQRAAFAVKHALVSVEALSAVFHVALHSVHASQSVE AKRLFQEVVVPNLDIFVVSAFGVPKPWPTMAVDTLNSLFESFLYKRSTEYDFVLDSLWKK DKEWVIQRLVEAHAIKPTDLPLIFEHAMKHKWLDELVYLPNGFGLDLAALSHAERYLDLV SWARRNSERSNEIARSLLQFLLIKANLELQYQRPPDGQPAVKSSTTLQVRTVAAFLQILE DFLPKTPLQDLIMVQRSCITVYPRLINYGEGFDDIIDANGKDGNALPPAANSKMEEHYKK MYGDEIQVRNIVEILDRYKHSRDSLDQDVFACMIHGLFDEYAHYVDYPLEALATTAVLFG GIISHKLISDLPLKIGLGMILEAVRDYLPEDSMYKFGLQALMQLFSRFREWPGFCRQLLQ IPGLQGTEAWKKAEDVVRDHEEELVRSRNGIAAPAHGLPFNSEPLTNGNTTEVRSTERQP PPFTSINASEHSPGVDCEEPSSDTQGKIQFVLNNLTEMTLQTMCQELRDILEHRYQQWFA SHLVEERAKMQPNYHQVYLELVKLFEDQVLWGEVLRETYVSVARMLNSEATMQNSTDRSH LKNLGGWLGLLTLARDKPIKHKNIAFKQLLIEAHDTKRLIVVIPFVCKVLLQGVNSTVFR PPNPWLMDIIHFLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRATVEDTH ELLSQDTLETFENLSLNGISTGVTTGLSPQVITASIPDLGPLIHIPPTNEMVVTATRLHE IVRTALTRALQDIIQPVVDRSVTIAAISTQQMIHKDFATEPDEARVRTSAISMVKATAGS LALVTSKEPLRANFTNYMRNLSNDLPQGLPEGTIIMCVNSNLDLACNIIEKQAEERAVPE IEEMIEPELEARRRHRLQRPNEPYVDASLSRWAWTIPNPFKLSPSMGGLNPEQMAIYEDF ARQPRTTTSSAPSHVPSASDATRSLANEVLQDQFSTVPSLGAATEPPAVQHLGSQIQQYA PVHNGAMATTRPQTFPMDGRALIDRVQKLLMELQRVATEAREEHFADLPRPHPVLDVVDA LVQHMIKASQTSEEFAIYAADQIIQIIFTQVEDNLALESLVHVLETLRKISGPTLNNRVT ALFRQQPGSTFLTLPLLAALLRTDLLDWRNIDLSMSKVLQQRKEGSLEFLEQMVDLTLLG NRPMALYGDFVRTLETAWSWIQDDPESPIAQRLKAKLSGQTLPQTAHQEDDSAIQQDQME YVFDEWIHLCNNPNASENSAILFVQQMQIRGVIKTKDDLFLFIRIATDMSVDRFEHFLHT TGTLTDAFLAIDALAKAINTFIRLHGETEPTPTPSRAVYLDSILAFVTLVLNHHHVQRSE HFNQRVFHRLLSVLLYEISSTAEQLPEAERSEMFLKFAARLEDLGPKFLPGFVFGWLSLL QHRSFLPTIMKDRAGWVAFTRLLQLLLEHVGEQVKAIEPSNVAREIYRATLKLLVILQHD YSEYLAAHSHQLTASVPPHCKQLLNAILTANPAAHPKMPDPSFPGLQIDRLDEVRDSPDS LDNSAVILRDSGLLEVLDHALQNGPSEDTLAHITRAIVESPRADTGFGHVPINANLPVIE AVTLHVGNHAVEQSTQKGTDVFNPASSDVAVMSLLLHELPPEARYYLITSLTNQLRFPNA HTNYFSRVLLEIFGQDMNDPEETEIRQQITRVLWERLIGYWPQPWGLMVTVVELLKNEKY MFFDLPFVKSNPEKRVQVIERFHAILQRA NT seq 6570 nt NT seq  +upstreamnt  +downstreamnt atggtcccacaatcaagatcgggatcattctctccacatccttcacagttactgcagaca ggatcagggcactcgccccatacatcgcaacccgctgcgttgagtgcgggcgccagtcct agtacgagcagtccgacaggacccagtcccctggtcaaaatcgctgttgcccaagtttat cttctccttggtgctatcaaggaggacaaggaccgcgcaaagtgggagatacaagcagaa caattgcaaaagctcattgatgaacacggaatggaggtctttaccaagtatttcgcgcgc ctcgtcgccgttcatgccgcccacatcttccatggacagccacgggccggagccaatggc aacttccatctgttggtgacggagatgcagaaaatatctcatgacgttcaccaggccaac aagattgccgaatccatcgaaacgggcacagaagacatattccgcgactttgatatgtcc acattcatggaggctttcaagttggatgccctggagaagacgatgctggcgttagccttc aaaatggggtctaggtccgaccttaagacgaaggctgatgctatcctgtccacgaatttc cctacattcgtcaatatccttgcccgacgcgatatagaagagcattcggaccttacagac caattcatcgccgtgctcgttgatcgcttcatccaataccagccacccagtttcaatgcg gcatctaaggccgaacttgcgtacaaggtacaggcaaggtggcacggggatcaagcaccg ccgccctccgaagtactcgcggcgctcgatctggtcagggtactggccgataaacctccg aatgccctcgccacatacattcaaagaaccggcgtcgagttcacccgagacgaagagatc tgctcatcgcacctgcagaaccgcccgcagaacgttcaactgagtgaagagcaagtttcc attgccctcatgtacagcacgattagtcagtccccgctctacgatccctcgatccttgcc gcatctctacgtcgagttcttcctccgtctttcaggtggcaggacgtggtttcgtatctg gaccagagatccgcccggatttcgtcccaacagttcctgcgcttgtacaactcgttgttg ccaattgcacaagatgatcaaacgtttgacatccaaaagttgtggggtgggaactgggag cacccagaaactcaactgtccttcatttgcgcattcgcttctctacaacccgatcagctt gacgctagcaccatcccgggcctggtaccgacgctcaccctggacacatatgcgcaatca ccccccgaggttcaacaacgcgcagcgttcgccgtcaagcatgctttagtctcggtcgag gcgctgtctgccgtatttcacgtcgccttgcactctgttcacgcgtcgcaaagcgttgaa gccaagcgcctattccaagaggttgttgtgccaaatctggatatctttgtcgtctctgcg ttcggagtaccaaagccttggccgaccatggcggtggacacgctgaattcccttttcgaa agcttcttgtacaagcggtcaacggaatatgacttcgtcctcgacagtttgtggaagaag gacaaggaatgggtgatccagcggttggtcgaggcccacgccatcaagccgaccgacctc cctctgattttcgagcacgcaatgaagcacaagtggctcgacgagctcgtgtatctgccc aacggttttggtctcgaccttgccgcgctttcacacgccgaacgttatttggacctggtc agctgggctcgccgcaactccgagagaagcaacgagattgcccgctccttgctgcagttc ttactaattaaagcgaatcttgaattgcaataccagcgccctcccgacggtcaacccgca gtcaagtccagcacaactctccaagtgcgaacggtagccgctttcttgcaaatcttggaa gattttttgccaaagacacccctgcaagatctcatcatggtgcaaaggtcttgcatcact gtttatccaaggttgatcaactatggcgagggtttcgacgacatcatcgatgcgaacggc aaagacggaaacgccctcccccccgcggccaacagcaagatggaagaacattacaagaag atgtacggcgacgagattcaagtccgcaacattgtcgagattcttgatcgatacaagcac tctcgcgactcgctggaccaagacgtgttcgcgtgtatgatccacggcttgttcgacgag tacgcccattacgtcgattacccactagaggcgcttgcgacgaccgcggtattgtttggc ggcatcatatcccataagcttatctcagatttgccgctgaagattgggcttggaatgatc ctagaggccgtaagagattatcttccggaagattcgatgtacaagttcggactacaggcc ctgatgcagctgttttctcgcttccgagaatggcccggcttctgccgacaattactccag attcctggtctccaaggtactgaagcctggaagaaagcggaagacgttgtcagagaccac gaggaagagcttgtccgatcgcgtaacggcattgcggcgcctgctcatggtcttcctttc aatagcgagccattgacgaatggcaatacgacggaggtcagaagtacggagcgtcagcca cccccgttcacatccatcaatgcctcggagcattctcctggagtcgattgcgaagagccc tcgagtgatacacaaggcaagatccagtttgtcctcaataacctaacggagatgactctt cagacaatgtgtcaggaactgcgggacatcttggagcatcgctatcagcaatggttcgcg agccatctcgttgaggagcgagccaagatgcaacccaattaccaccaggtctaccttgaa ctggtcaagctattcgaagaccaggtgctatggggcgaagtcctgagggagacatatgtc agtgttgcccgcatgctcaattcagaggccaccatgcagaattcgaccgatcgttctcac ctcaagaacctcggtggatggttgggtcttctgaccttggcacgcgacaagccgatcaag cacaagaacattgctttcaagcagttgctgattgaggcccacgacaccaagaggctcatt gtcgttatccctttcgtctgcaaggttcttctccaaggcgttaattcgactgtttttcga ccacccaacccctggctcatggacatcattcactttctcatcgagctgtatcatcatgct gagttaaagctgaatctcaagttcgagattgaggttttgtgcaaaggtctaaatctcgac cacaagagcattgaaccctctggagaaattctcaaccgcgcgaccgttgaggacactcat gagttgctttctcaagacacactggagacgtttgagaatctatctctgaatggaatctct accggcgtaacaaccggcctttcgcctcaggttatcaccgcttccattccagaccttggt ccgcttatccacataccgcccacgaacgagatggtagttaccgcaacgcggctgcacgag atcgtccgcaccgctctcaccagggctttgcaggatatcatacaacccgtggtagatcgt tctgtcaccattgctgccatttccacgcagcaaatgattcacaaagactttgcgactgag cctgacgaggccagagtccgaacatcggcaatcagcatggtgaaggcgacggctggaagc ctagcgctcgtgacgtctaaggagcctctgagggccaactttacaaattatatgcgaaac ctgtcgaatgatctcccgcagggactacccgagggaacgattattatgtgcgtcaactca aatctggatctagcctgcaacatcatcgagaaacaggcggaggagagggccgtgcccgaa attgaagaaatgatcgagcccgagttggaggctaggcgccggcatcgtcttcagcggccc aacgagccatacgtggatgcctcgctcagccgatgggcctggactattcccaacccattc aagctgtcgccaagtatgggtggcttgaatcctgaacaaatggctatctacgaagacttt gctcgccagcctcgcaccaccacatcaagtgctccgtcacatgtgccttcggcttctgat gcaacccggtcgcttgccaacgaagttctccaggatcaattttccacagtgcccagccta ggcgcggctacggagccgccggctgtccagcatctcggctcccagatccaacaatacgcc ccggtacacaacggagcgatggcaaccacaagaccccagacattcccaatggatggccgg gcattaatcgaccgtgttcagaagttgcttatggagctccagcgtgttgcgaccgaagcc cgcgaggagcattttgcagacctgccccggcctcaccctgttcttgatgtcgtcgacgcc ttggtccagcatatgatcaaggcatcgcagacttccgaagagtttgccatatacgcagcc gaccaaatcatccagatcatcttcactcaagttgaggacaacttggccttggagagcttg gttcatgtgcttgagacattgaggaagatatctggcccaacgctgaacaatcgcgtcact gctctgttccggcagcagcccggatcgacctttctaactttgccactccttgcggcgctg ttgcgcacagatctccttgattggagaaacattgacctatcaatgtccaaggtcctgcaa cagaggaaagaaggttcgctggagttcttggagcagatggtggaccttacacttctgggc aatcgaccgatggcgctctacggagacttcgttcgaacgcttgagaccgcttggtcttgg atacaagatgacccagaatcgccgattgcccagcgcttgaaggcaaagctttccggccaa acattgccgcagactgcgcaccaggaggacgacagcgccattcagcaggaccagatggag tatgtttttgacgaatggattcatctctgcaataacccaaacgcgtcagagaactctgcc atcttgtttgttcagcaaatgcagatcaggggcgtgatcaaaaccaaagacgacctcttc ctgttcattcggatcgcgacagatatgtcggtggacagattcgaacactttcttcataca acagggactttaacagatgccttcctcgctattgacgccttggccaaggcgattaatacc ttcatccggctccatggcgaaacggagcctaccccaacccccagccgtgcggtctatttg gactccattctggctttcgtcaccctcgtcctcaatcaccatcatgtgcagcgctcagaa cacttcaatcagagggtgttccatcgtctcttgtcggtcctgctctacgagatcagttca accgcagagcagcttcctgaggctgagaggtctgaaatgttcctcaaattcgctgccaga cttgaagaccttgggccaaagttcctccccggctttgtttttgggtggctttcgcttctc cagcaccgctcgttcttgcccacaatcatgaaagatcgtgctggatgggtcgcgttcacc aggctcttgcagctgcttctggagcatgtcggagagcaagtcaaggcgatcgagccttct aatgtggcacgagagatttatcgcgcgacgctgaagctgctcgtcattctgcagcacgat tactccgagtacttggctgctcattcgcaccagcttacagccagtgtcccgcctcactgt aaacaattgctcaacgccatcctgacggcgaacccagcggcccatcccaagatgcccgat ccatcgttccctggcttgcaaattgaccggttagatgaggtacgggactcgcctgacagc ctagacaactctgcagttattttacgagactcgggcttgcttgaagttcttgaccacgcg ctgcaaaacggcccctcggaagacactttggcacacattactcgggccattgttgagagc ccaagagctgacaccggcttcggacacgtgcctatcaatgccaacctaccggtgattgag gcagtcactctacatgtcggtaatcatgctgtcgagcaatcaacgcaaaagggtaccgat gtcttcaacccggcctcatcagatgtggctgtcatgtctctactgctccacgagctcccg cccgaggcgcgttactatctcatcaccagcctaaccaaccagcttcgatttccgaatgcc cacaccaactacttcagccgcgtgttactggaaatcttcggccaagacatgaacgatccg gaggagacggagattcggcagcaaattactcgagtactttgggagcgcctcattggctac tggcctcagccgtggggtctcatggtgacggttgtcgaactgcttaagaacgagaagtac atgttctttgatctccccttcgtgaagtccaacccagagaaacgcgttcaggtcattgaa cgatttcacgccattttgcagcgcgcctaa

DBGET integrated database retrieval system