Colletotrichum higginsianum: CH63R_06389
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Entry
CH63R_06389 CDS
T08176
Name
(RefSeq) Nucleoporin autopeptidase
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_06389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_06389
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_06389
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_06389
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CH63R_06389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
PD40
Motif
Other DBs
NCBI-GeneID:
28865471
NCBI-ProteinID:
XP_018159214
UniProt:
A0A1B7YF06
LinkDB
All DBs
Position
4:complement(3614544..3620896)
Genome browser
AA seq
2004 aa
AA seq
DB search
MSGFGSTGFGGFGSTNNQPSTGFGGFGANNNTTATSTGFGSGNTASNAFGSTSNTNTGGG
LFGGGGGGSTTTSAFGGTSSGRLLMLPWERDQGLTWVSRIAILTVVSTGGFGSNTGTTFG
AAKPAFGATPSTGGGLFGASNTTNNATTTSTGFGGFGSNPTTNTSSPFGGASSSGGGLFG
GANKPAFGSATNTNTTGGTSLFGGGNTSGGFGSNTTTGGGFGASMNPGIGSNVGDPPGTA
LTPFQAHQEKETTGAGNQSNSFQNVLFQEPYKKWSSEELRLADYAQGRRHGNASGTGAFG
VSNFGSGGFGSTANQQSSGFGTGASTGGGLFGGGNNTTNTTSATSGFGSGSAGGFGAGSG
GLFGNNAAKPATGGLFGGGTATPSQPAQSGGLFGGGASTGGGFGTTGTTGGFGATNTNTG
GGLFGSNTNNANQNKPSGFSFGNTGGSTTGGFGSTANTSFGANNTNTAASSTGGGLFGNA
AQSTGGGLFGNNQSQPQQQSTGSAFGGGGGFGAQAQQSGGGLFGNNQQKPATGGGLFGGG
GASTTGGGLFGGGNAPSNSFGGANTTNNSGGGLFGAKPATTGGGLFGSNTTGQNTTTGGG
LFGGGLGANNNNQQQQQQQQQTGQSSLFGGGQNQTKPGGLFGSSQPAGGGLFGGQNTQQQ
GSLFGNNQQQQQQQPQSSFLGGSLLGNSQGVNSGPQSLTANINDVSAYGSPSLFSNLQGS
ETPNPGPLATPLSSKSKPRRSSILPMYKLNPASAARFATPQKRGFGFSYSTYGTPGGSPS
SAASTPGGASRSLLGSSSFNRSLSKSVSTSNLRRSFNAEDSILAPGAFSSSSGPRYYGQN
GSVKKLIINKDMRSDLFSTPTKDKPSSDQANGSRKLSKRVSFDTSTMDAPEGDDDESVIT
STPRGGATAQDAAPTGAHVSGTNASAGTSGESDPSKGKELAIVHEEDASSQAIVHKEGLD
AAPGAYWMSPTKEVLASMNRVQRQQVTGFTVGRDNVGSVQFKVPVDLTNIDLDEIFGGIV
ILETRSATVYPIAAKKPPVGKGLNVPATITLEQSWPRGRDKRPSNDAKRFHKHVERLKRI
ENTTFENYDTETGVWKFSVEHFTTYGLDYDEDEDEAEQPAVEQPRQDVSFENASQQDSYD
SESSPREDDTFDFRRNKRRALPGAFDYRDEDFEVQDAQRPSHPQSFLGDSFAGSTSNALI
LSAEETDDQDNGYGLSEDEDTVGTPLRRHLAAEQTIDPPQDDIAVPASETPGGILRARMR
ALKGSATPMKLQVAGGDEWMDMLQRSVSPQKRDRAFLRSVNEAALQPAVQDAEATGQRGR
VVSDGRGFATSIDLMNSLFERAKAPSVPAPSRGFVQWPYERQTKSFVDQSDLGEADRSFY
NSMRPSWGPDGTLIFASTRSSLEGAGRRNTADNLMITKNFIQAQGREIQSAKFSNEASAK
TLENQMQMTRIELAGGVPEPSLQPVSLKSLFHDQDVSNPASMHEKLVWELASILFDATTA
VNETAEAETRRKTLSRFWAALVDSASSRSVALARSGEEKAIAALSGHRVQDACKYLLDGK
NFRLATLVSLIGSNDQSKKDMREQLNEWQEANFLSEFAEPVRAIYELLSGNSCVCEGKKG
VPLEDRIESFVISERFGLDWKQAFGLRLWYSIPRKGDLSDAVRLFQEDVAQDREQRPQTW
YLEQGISALWQDQDQDQREDLLWGLLKLFADEETNLEAVLRPENSQLSPFDVRLSWQLSR
ALVSTSKVSYGPGATEKADALTISFADQLVNEGSWLEATFVLLHLSQPEMRAKAVQDNLC
RHAGLLGPETGPNFATLTQTLKVPSAWIWEAQALYMRAVKKDAAAEVQCLLRAASYSEAH
EVFVHKVAPSSVISRNYDELAAILSRFDDHDDDIAGWTLGGEVYKAFLELVNCRRQRQQV
PLPVLEKLVAGLPAMRENVENVNITSLAAISEMGSSVAKVMVETSRKEEDVPRVLGLPLT
EDAHLKHSLHLSLSYYEGLMAGAR
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttcggtagcactggcttcggcggctttggctcgaccaacaaccagccatca
actggttttggagggttcggggccaacaacaacacaaccgccaccagtactggcttcggc
tctggcaacacagcaagcaatgcctttggatccaccagtaacaccaatactggtggcggc
ttgtttggtggcggtggtggtggcagcaccacaaccagtgcttttggcggcacgtcatcg
ggtaggttgctcatgctgccgtgggagcgtgatcaaggcttgacatgggtttcaaggatc
gctatactaactgttgtctccacaggcggcttcggatccaatacaggcaccaccttcggc
gcagcgaaacccgcctttggtgccacgccgtctaccggaggtggtcttttcggtgcctcg
aacactaccaacaacgcaaccacgacatccacgggctttggcggctttggctctaatcca
acaacgaatacctcatcgccgttcgggggagcttcctctagcggcggaggcctgtttggc
ggcgccaacaagcccgcctttggctctgccaccaacaccaacactaccggtggtacatca
ttgtttggtggtggaaacacatctggcggcttcggcagcaacaccaccaccggtggcggc
ttcggcgcatcgatgaaccccggcatcggttccaacgttggtgatccgccaggtaccgct
ctcactcctttccaagcacaccaagagaaggagactaccggagcaggcaaccagtccaac
tcattccaaaacgttttgtttcaggagccgtacaagaagtggtcgtccgaggaactgaga
ctggctgactacgcacaaggacgccgtcacggtaatgctagtggtactggagcctttggt
gtttccaactttggcagtggcggattcggttcgacggccaaccagcagtcatcgggtttc
ggaacgggcgcatctactggaggcggtctttttggaggcggaaacaacactaccaacaca
acatcagcaaccagcggtttcggcagtggctctgccggagggtttggtgctggcagcggt
ggtctttttgggaacaatgctgccaaaccggctactggaggcctctttggcggtggcact
gccaccccttcgcaacctgctcagtccggcggactcttcggcggcggcgcaagcacagga
ggcggattcggtaccacaggcacgaccggtgggtttggtgccacaaacaccaacacaggc
ggcggtctattcggctcaaacaccaacaacgcaaaccagaacaagccgtctggcttcagc
ttcgggaacactggaggaagcactaccggcggctttggaagcacagctaataccagtttc
ggagccaacaacaccaacactgctgccagctccacgggtggtgggctgtttggcaacgct
gcccagtctacaggcggtgggcttttcggaaacaatcagtcgcagcctcagcagcagagc
accggctcggcgtttggcggaggcggcggattcggcgcacaagcgcaacaatcgggcggc
gggcttttcggaaacaaccagcaaaagccggcaacgggcggtggtctcttcggaggcgga
ggggcgtcaactaccggaggcggcctttttggtggtggaaatgctccctccaactcgttc
ggcggcgccaacacaaccaacaatagcggcggtgggttgttcggggcaaagccagcaacc
acaggtggcggtctctttggctcaaacacgactggccagaacacgaccactggtggcggc
ttgttcggaggtgggttgggcgccaacaacaacaatcagcagcaacagcagcagcagcag
cagactgggcagtcctccttattcggtggcggccaaaaccagacgaagcctggcggtctc
ttcggctcatctcagcctgcgggtggtggtttgttcggagggcagaacacgcagcagcag
ggttccttatttggaaacaaccaacaacagcagcaacaacaaccccagagctcattcctt
ggcggctcgcttctgggcaactcccaaggtgtgaactctggtccccaatccctcacggct
aacatcaacgacgtgtctgcgtacggttcgccgtccttgttctccaatctccaagggtcc
gagacgcctaacccaggcccgcttgctacacccctttctagcaagtccaagcccagacgc
agttccattctgcccatgtacaagctgaatcctgcgtcagccgctcgttttgcgactcct
cagaagagggggttcggtttctcttacagcacatacggcactccaggtggtagcccttcg
agcgcagcgagcactcctggcggtgccagccggagtttgctcggatcttcgtcgttcaac
cggagtctgagtaagagcgtatcaactagcaacctaaggagaagcttcaatgcagaggac
agcattcttgcgcccggtgctttctcatccagctcaggacctcggtactacggtcaaaat
ggcagcgtcaagaagctgatcatcaacaaggacatgcgcagcgacctgttctcgacccct
accaaagataaaccttcttccgaccaagccaatggttcccgcaagctatcaaagagagtt
agctttgacaccagtacgatggatgcccccgaaggtgatgacgacgagagtgtcatcacg
tctactcccagaggtggcgcgaccgcacaggatgcagcacccactggtgcccatgtcagc
gggaccaatgcatcagccggaacctcgggagaatcggacccaagcaagggcaaggaactt
gccatcgttcatgaggaggatgcatcgtcacaggctatcgttcataaggaaggtctcgat
gcggctcctggtgcttactggatgagtcccaccaaggaggttcttgcctctatgaataga
gtgcaacgccagcaagtcacaggcttcactgttggcagggacaacgttggcagtgtgcaa
ttcaaagttcccgtcgacctcacgaacattgacctggatgaaatcttcggagggattgtc
attctggaaacccgttcggcgaccgtctaccccatcgcagccaagaagccccccgtgggt
aagggcttgaacgttccggcaaccatcaccctggagcaatcttggccgcgtggcagagat
aagcgacctagcaacgatgccaaacgattccataagcacgtcgaacgcctcaagcgcatc
gagaacacgacgtttgagaattatgacactgagacgggtgtttggaagttctcggtcgag
catttcacaacatatggtctggattacgacgaggacgaggacgaagctgagcagcctgca
gttgaacagccccgccaagacgtttctttcgaaaatgcctctcagcaagactcgtatgat
tccgagtctagtcctagggaagatgacacatttgattttcgcagaaacaagcgtcgcgcc
ttgcctggggcgttcgactaccgggacgaggactttgaggttcaagatgctcagcgacct
tctcatccccagtcttttttaggggatagcttcgcgggttcgacgtccaatgcgctaatt
ttgtcggcggaggagaccgacgaccaggacaacggatatggcctgtctgaggacgaggat
acggtggggacccccctcagacgccatctcgccgcggagcaaacaatcgatccgccgcag
gacgatattgcagtccctgcaagcgaaacaccgggtggcattcttagagcgagaatgcgg
gcactgaagggttcggctacgcccatgaagcttcaggtcgccggaggagacgaatggatg
gatatgcttcaacgctctgtcagccctcagaagagagatcgagcattcctgcgaagcgta
aacgaggcagcactgcaaccggctgtccaggacgctgaagcaacgggccagagaggccga
gtcgtatctgacgggcgcggcttcgccacaagcatcgacttgatgaactcgctgtttgaa
agggccaaggcgccatctgtgcctgcgccttcgagaggatttgttcagtggccctatgaa
cgacagaccaagtcttttgttgaccaatccgatctgggtgaagccgaccgctccttttac
aactccatgaggcccagttggggacccgacggaactttgatttttgcctccacccgctcc
tctctcgagggcgccggcaggcgaaacacggccgacaacctcatgatcaccaaaaatttc
atccaggcccagggtcgcgagatccaatcggccaaattttccaatgaggcctccgcaaaa
acgcttgagaaccagatgcagatgacacggatagagctcgcaggaggtgttcccgagccg
tctttgcagcctgtatcgctcaagtctcttttccacgaccaggacgtaagcaacccggcc
agtatgcacgagaaactcgtctgggagcttgcgagcattctcttcgacgcgactactgcc
gtcaacgagacagccgaggctgaaacccgtagaaaaacattgtcgcggttttgggcagca
cttgtcgactctgcgtcatcaaggtccgtcgctctcgcgagatcaggtgaagaaaaggcc
attgctgccttgtctggtcatcgggttcaggacgcctgtaaatatctccttgacggcaag
aacttccgcctcgccaccttggtgtccttaattggcagcaatgatcagtcaaagaaggac
atgcgcgaacaactgaacgaatggcaagaagccaactttctatccgagtttgccgaaccc
gttcgggcaatctacgaacttctcagcggcaactcttgcgtttgcgagggaaagaagggt
gttcccctcgaggaccgcattgaatcttttgtcatctccgagcgattcggactggattgg
aaacaggccttcggcctccgtctgtggtattccatcccacgaaagggcgatctttcagat
gccgtccgtctttttcaagaggacgttgcccaagacagggagcagagaccgcagacatgg
tatcttgagcaaggcatttcggcgctctggcaagaccaagatcaggatcagcgcgaggac
ctgttgtggggcctcctcaagctcttcgcggacgaggagaccaacctagaagctgtgttg
cggccggaaaatagccagctgtcgcctttcgacgttcgcctgagttggcaactcagccgc
gccctggtctctaccagcaaggtgtcctacggccctggtgcaaccgaaaaagcggatgcc
ctgaccatctccttcgccgatcagctggtcaatgaaggaagttggctcgaagctaccttt
gtcttgctacacctcagtcagcccgaaatgagggccaaggctgtgcaggacaacctctgc
cgtcacgccggccttctgggaccggagaccggccccaactttgcaactctcacgcaaacc
ctgaaggttccgtcggcatggatctgggaggctcaggctctttacatgagggccgtgaag
aaagatgctgctgctgaggtgcagtgcctgctccgcgcagcctcttattctgaggcacac
gaggtcttcgtgcacaaggtggctccgtcttctgttatcagccgcaattatgacgagctg
gcggctatactgtctcgctttgatgaccacgatgacgacattgcaggttggactcttggc
ggcgaggtttacaaagcgttcctggaacttgtgaactgtcgcaggcagcgacagcaggtt
cccttgcccgtgctcgagaagttggtcgcaggcctgccagcaatgcgtgagaatgtcgaa
aacgtcaatatcacgagcttggcagccatctctgaaatgggatcaagcgtggccaaggtc
atggtggagacgtccagaaaagaagaggacgtaccccgagttctgggtcttccactcaca
gaggatgcccacctcaagcactctcttcacctcagcctatcctactacgaagggctcatg
gccggagccaggtaa
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