Colletotrichum higginsianum: CH63R_06510
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Entry
CH63R_06510 CDS
T08176
Name
(RefSeq) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CH63R_06510
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CH63R_06510
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
NPCBM
SdrD_B
Motif
Other DBs
NCBI-GeneID:
28865592
NCBI-ProteinID:
XP_018159335
UniProt:
A0A1B7YG98
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Position
4:4021331..4023230
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AA seq
564 aa
AA seq
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MKVSGLSAIAVAGTLVNAAKGPFLEQINDSTWVIGNDHWNLTQGALYATKLFWEGVPGAD
LVGSAVGHYVGYDGENNLRFTNATVASRGTDYIDVSFSAAAGDFHWVIFDDLPGAYQYFV
NRALPDISILRTLWRLAPDLFPNGRTHLKDEPLPDFSLYASATNVQDETWQLADGSFITK
YDWSNAVRDRDFYGVYGPKAGSWYIHPSTEYYNSDHLSQTLTVHRESKTGDAVQLNVVQD
TSHFRVGQKVAQPEGKVWGPWLWYLNNGDVADAARKRKEEDKHVPYTWFKDAAYHSRGGV
QGTLTLSDGRPASGAAVFLGDADTTVRPSIQGRNYYYTTYANDEGRFSFDGVRSGSYTVY
ATSNGSKLGDVYTNFTAPVAVAKDKTLKLGQLTWGVPPKGKRVFQVGEFDKKASGFRNGG
VPYQHGVAAQSPANLTFTVGKSQDSDWYFAQSALGKWTIEFGLAAGDVAANRTALLSVSL
AGYSQSGALDVDVNGHVYGSLNKDGLTSDPALYRSGKVSGEWRFLQYRIDADVLRAGVNT
VGFTVTRYTQWRGFLWDSIILEWI
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccgggctatcagctatcgccgtggccggcacactggtcaacgccgccaaa
ggaccgttcctcgagcagatcaacgattcgacttgggtcatcgggaacgatcactggaac
ctgacccagggcgcactctacgctaccaagcttttctgggagggtgtgccaggcgccgat
ctggtgggctcggctgtcggtcactacgtcggctacgacggagagaacaacctcaggttc
accaacgccaccgtcgcgtcccggggaacggactacatcgacgtcagcttctccgccgct
gccggcgacttccactgggtcatctttgacgacctgcccggcgcgtaccagtatttcgtc
aaccgcgccctgcccgacatcagcatcctgcggaccctgtggaggctggcgcccgacctc
ttccccaacggccgcacccatctcaaggacgagcccctgcccgacttctcgctgtacgcg
agcgcgaccaacgtccaggacgagacctggcagctggccgacggctccttcatcaccaag
tacgactggtccaacgccgtcagggaccgcgacttttacggcgtctacggacccaaggcc
gggtcctggtacatccacccctcgacagagtactacaacagcgaccacctgagccagact
ttgacggtccaccgggagtccaagaccggcgacgctgttcagctcaacgttgtccaggat
acttcgcactttcgggttgggcagaaggtcgcccagccggagggcaaggtctgggggcct
tggctctggtatctgaacaacggagacgtcgcggatgccgcgcggaagcgcaaggaggag
gacaagcacgtcccctacacctggttcaaggacgcagcctaccactcccgcggcggggtg
caggggaccctgacgctgtccgatggccgcccggcctcgggcgccgcagtcttcctcggc
gacgccgacacgaccgtccgcccgtcgatccagggcaggaactactactacaccacctac
gccaacgacgagggccgcttctccttcgacggtgtgcgcagcggctcctacaccgtctac
gcgacgtccaacggcagcaagctcggcgacgtgtacaccaacttcaccgcgcccgtcgcc
gtcgccaaggacaagacgctcaaactgggccagctcacgtggggcgtcccccccaagggc
aagcgcgtcttccaggtcggcgagttcgataagaaggccagcggcttccggaacggcggc
gtcccgtaccagcacggcgtggcggcgcagagcccggcgaacctgaccttcaccgtcggg
aagtcccaggactcggactggtacttcgcgcagtcggcgctcggcaagtggacgatcgag
ttcggcctcgccgcgggcgacgtcgccgccaaccggacggcgctgctgagcgtctccctg
gccgggtactcgcagagcggcgcgctcgacgtcgacgtcaacgggcacgtctacggctcg
ctgaacaaggacggcctgacgagcgacccggcgctgtaccgctcgggcaaggtcagcggc
gagtggcggttcctgcagtacaggatcgacgcggacgtcctccgggcgggcgtcaacacc
gtcggcttcaccgtcacccgctacacccagtggagggggttcctgtgggatagcatcatc
ctggagtggatttga
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