Colletotrichum higginsianum: CH63R_06634
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Entry
CH63R_06634 CDS
T08176
Name
(RefSeq) Replication factor A protein 3
KO
K10740
replication factor A3
Organism
chig
Colletotrichum higginsianum
Pathway
chig03030
DNA replication
chig03420
Nucleotide excision repair
chig03430
Mismatch repair
chig03440
Homologous recombination
chig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH63R_06634
03420 Nucleotide excision repair
CH63R_06634
03430 Mismatch repair
CH63R_06634
03440 Homologous recombination
CH63R_06634
03460 Fanconi anemia pathway
CH63R_06634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_06634
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_06634
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CH63R_06634
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CH63R_06634
MMR (mismatch excision repair)
CH63R_06634
DSBR (double strand breaks repair)
HR (homologous recombination)
CH63R_06634
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
28865716
NCBI-ProteinID:
XP_018159459
UniProt:
H1VDY5
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Position
4:4407398..4408012
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AA seq
108 aa
AA seq
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MAEPTSTPRITAQYLDSYVGRNVMLVGKVLQLRGDSAVLDADGNVTAILNRDVHLTNGNA
AQIIGKVNPDLSIKVLSSRDLGPDVDFQLAAAVVEATHHHKSLFVFDN
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccacgtccaccccgcgcatcacggcccagtacctcgacagctacgtcggc
cgcaacgtcatgcttgtcggcaaggtcctgcagctgcgcggggactctgccgtcctcgat
gccgacggcaacgttacggccatcctcaaccgcgatgttcacctcaccaatggcaacgct
gcccagatcatcggcaaagtcaaccccgatctgtccatcaaagtgcttagctcccgtgat
ctgggacccgatgttgacttccaactcgccgccgccgtcgtcgaggcgacacaccatcac
aagtccctcttcgtcttcgacaactga
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