Colletotrichum higginsianum: CH63R_06656
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Entry
CH63R_06656 CDS
T08176
Name
(RefSeq) helicase associated domain-containing protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_06656
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CH63R_06656
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
Helicases
CH63R_06656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
OB_NTP_bind
HA2_N
AAA_22
AAA_19
ResIII
nSTAND3
ATPase
PhoH
T2SSE
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
28865738
NCBI-ProteinID:
XP_018159481
UniProt:
A0A1B7YGF5
LinkDB
All DBs
Position
4:4465294..4468932
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AA seq
1212 aa
AA seq
DB search
MPKFVPRQRKHKVLAREKAKGNGVIDLDTNTDEILPEDQKRLQEKREQLKAELQGDGVKA
SGKKAKRLEKYITNKLRKDENREILAKLAQQKVDTSLFSSTKTLGQGKETKRQTLIRTLR
EKNAGLEVDPDAEELLYEERKDAPEPDSDDSEAEAPKAIKPAPKPQAPGPAQAAAPPPPT
STSVSASVSASSTAPAPVAKPEPQPPASVGSGLKRPLDVDEAGRPVLRKRQKRGGVVSKF
SIAEPEKVKDAEDEWGGISNDEDMEDQGSGDNEEESEEESEESSEGSEEESEDDDEDEDE
DDDSGNKRQSAFKAWAHAQRNQALGYEPVTPTSTALEIPRPENFQPRPLEQEPLPQELQP
TTNLARKAYAVQVTRTPEIQEARLKLPVVAEEQRIMEVIHNNDIVVVCGATGSGKTTQVP
QFLYEAGYGSPGSATPGMIGVTQPRRVAAVSMSKRVGQELGDHSDRVGYQIRFEGTTSAK
TAVKFMTDGVLLREMAQDFSLKKYSAIIIDEAHERSVNTDILVGMLSRINNIRKGDDKID
PSIKPLKIIIMSATLRVEDMTNNTTLFPTPPPVVEVEGRQHPVTIHFARRTETDYVDEAF
NKIIRGHKKLPPGGFLVFLTGQNEIRHLSKRLTEEFGGFTGVSTPKVEISATDAPIEVED
IDFGEVDDADVADFDDGLDDDDNDDHKHEDDKEFEIEGEEGETGPQKMQVLPLYSLLPTR
EQMRVFDDPPENHRQVILATNVAETSLTIPGIRYVFDCGRSKERQYDRLSGVQTYEIGWI
SKASASQRAGRAGRTGPGHCYRLYSSAVYERDLPEFTDPEILRMPVDGVVLQLKAMNLSN
VVNFPFPTPPNRMGLHQAERLLTYLSAITPAGQITKIGSTMSIFPLSPRFARILLVGHQH
DCLPYTIMMVAALSAAEIFVPEHQAIPSLAARDESEFRSNADVIAEDRQANIRRLFNAAH
RNFCYLDDRSDAIKLLQVVGEYAHDPTEKWCEDHFVRFKVMKEITQLRQQITELLRANIP
AFKNLKYQDRLDAPSDKQVAYLKQMVAAGFIDHVALRADKSAVPPELARKPRRAIDVPYV
PLVPLGAGHDADKFVYIHPTSPLSHLSPQECPEFVVYSHLQRATQGADPNKTPKTRMQSL
TDVTGGQLASLAKGTPLVSYGKPVKEISSTASKREVWVVPYLRAEGVGGQGWPLPMKKVT
QRKVAGKGWVVE
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttcgtcccaagacagcgtaagcacaaggtgctggcccgagagaaggccaag
gggaacggtgtcatcgacttggacaccaacacggatgagattctccccgaggaccagaag
cgcctccaggagaagagggaacagctcaaggctgaactgcaaggggacggggtcaaggct
agcggcaagaaggcgaagcgtctggaaaagtacatcaccaacaagctccgcaaagatgaa
aaccgagaaatccttgccaagcttgcccagcaaaaggtcgataccagtctcttttccagt
accaagaccctcggccagggcaaggagacgaaacggcagactctgatccgtacgctcaga
gagaagaacgccggtttggaagtcgaccccgatgcggaggagcttctttatgaagagagg
aaagatgcgcccgagccggactctgacgacagtgaagccgaggcgcccaaggctatcaag
ccagcacccaagcctcaggcacctggaccggcacaagcagcagcaccaccaccaccaaca
tcgacgtcagtatcagcttcggtatcagcatcatcaacagcacccgcgcctgttgcaaag
ccggagcctcaaccccccgcctccgtcggttccggcttgaaacgcccgcttgatgtcgac
gaggcagggcggccagtgctccggaaacgccaaaagagaggcggtgtggtttccaaattc
tctatcgccgaacccgaaaaggtgaaggacgcggaggatgaatggggtggtatcagcaat
gacgaggacatggaggaccagggatctggcgacaacgaggaagagtctgaggaggaatcc
gaagaatcaagtgaagggtccgaggaagagtcagaagatgacgatgaagacgaggacgaa
gacgacgactcgggaaacaagaggcagtctgcgttcaaggcctgggcccacgctcaaaga
aaccaggcattgggctacgaaccagtaacaccgacttccacagcgctcgagattcccagg
ccagagaactttcaaccgcggcctctcgagcaagagcccctcccgcaggagctgcagccg
acgacgaatcttgcgcgcaaagcgtacgccgtccaggtgaccaggacgccggagattcaa
gaagcgcgcctgaagctcccggtcgtcgcggaggaacagaggattatggaggtaatccac
aacaacgacatcgtggttgtctgcggtgccactggttccggtaagacgactcaggtgcca
cagttcctctatgaggcgggctacggctctcccggctccgccacaccaggaatgatcggt
gtcacgcagcctcgtcgagttgccgccgtgagcatgtcgaagcgtgttgggcaagaattg
ggtgatcactcggacagagtcggataccagatcaggttcgagggtaccacatcggccaag
acggccgtcaagttcatgacggacggtgtgttgctgcgagagatggcgcaggacttctcc
ctcaagaagtactcggcaatcatcattgacgaagctcacgagagaagcgtcaacacggac
atcctggtcggcatgttgagccgcatcaacaatatccgcaagggcgacgacaagattgac
ccctcaatcaagccactcaagatcatcatcatgtccgcaacgctaagagtcgaagacatg
accaacaacaccacactgtttcccacgccaccacccgtggtcgaggttgagggacgacag
caccccgtcacgatccatttcgcccggcgcaccgagaccgactacgtcgacgaggccttc
aacaagattatacgcggtcacaagaagctgcctcccggaggcttcctggtcttcctcacg
ggtcaaaacgagatccggcacctgagcaagcgactgacagaagagtttggtggtttcacc
ggagtaagcacgcccaaggtcgagatctccgccacggatgcacctattgaggttgaggat
atcgatttcggcgaggttgacgatgcggacgtggccgattttgacgacggactggacgac
gacgacaacgatgatcataagcacgaagacgacaaggagttcgagattgaaggagaggag
ggtgagacgggcccgcagaagatgcaggtcctgcccctctactcgctgctacccaccagg
gaacagatgagagtctttgacgacccccccgaaaaccatcgtcaggttattctggcgacc
aacgtcgcggagaccagtttgacgatcccgggcatccggtacgtcttcgactgcggccgt
tccaaggagcgccagtacgaccggctcagcggcgtgcagacgtacgagatcggctggatt
agcaaggccagcgccagccagcgcgccggtcgtgccggccgcacgggacccggccactgc
tacagactctactcttcggccgtctacgagagagacctgcccgagttcacggaccccgag
atcctgcggatgcccgtcgacggggtggtcctccagctcaaggcgatgaacctgtccaac
gtggtcaacttcccgttcccgacgccgccgaaccgtatgggtctgcatcaggccgagagg
ctgctcacgtacctctcggccatcacaccggccgggcagatcaccaagatcggatcgacc
atgtccatattcccgctctcgccccgtttcgcgcgcatccttctggtaggccaccagcac
gattgcctgccgtacaccatcatgatggtggcggcgctctcggcggccgagatcttcgtg
ccggaacaccaggcgatcccgtcgctcgcggcgcgcgacgagtccgagttccggtccaac
gccgacgtgatcgccgaggatcggcaggccaacatccggcggctgttcaacgcggcgcac
aggaacttctgctacctggacgaccggtcggacgccatcaagctgctgcaggtcgtgggc
gagtacgcgcacgacccgacggagaagtggtgcgaggaccacttcgtgcggttcaaggtg
atgaaggagatcacgcagctgcggcagcagatcacggagctcctgcgggccaacatcccg
gcgttcaagaacctcaagtaccaggaccggctggacgcgccctcggacaagcaagtggcg
tatctcaagcagatggtggcggccgggttcatcgaccacgtggcgctgcgggcggataag
tcggcggtgccgccggagctggcgcgcaagccgcggcgggccatcgacgtgccgtacgtc
cctctcgtgccgctgggcgcgggccacgacgcggacaagttcgtctacatccacccgacg
tcgccgctctcacacctcagcccgcaggagtgccccgagttcgtcgtgtactcgcacctg
cagcgggcgacgcaaggggcggacccgaacaagacgcccaagacgaggatgcagtcgctt
acggatgtgacgggcgggcagctcgcgagcctggccaaggggacgccactcgtgagctac
ggcaagccggtcaaagagatatcgtcgacggcgagcaagcgcgaggtctgggtggtgccg
tacctgagggccgaaggcgtcggcggtcaagggtggccgttgccgatgaagaaggtcacg
cagcgcaaggtcgctggaaaggggtgggttgtagaatga
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