Colletotrichum higginsianum: CH63R_06776
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Entry
CH63R_06776 CDS
T08176
Name
(RefSeq) Rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CH63R_06776
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CH63R_06776
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
28865858
NCBI-ProteinID:
XP_018159601
UniProt:
H1UW67
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Position
4:complement(4800574..4802420)
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AA seq
532 aa
AA seq
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MYRFGVTFGLALLCGRVFAAFGLEESNSTYKVDTDGGLIFEVDRSNGDIVSLLFNDVQYQ
GTTKMSQINSGLGSSTVTAETVNGIVKITVQAGSQPLTHYYVAKPKDPTIYMATHITGEI
KPGELRWLARLQRKQVPTGVHGDVANLDGCQAFEGKDTFKCPDGTTRCKMYTSDRFIDDK
VHGVTGEGVGVWMIMPGNAYEHSSGGPFMRDINSQSGGDQELYWYMNSGHVRTEPWRLGL
LGPYAMRFTTGEKPSDDLDVSFFDSLDIKGYVADSGRGSVSGTAGGVAGDFETVVHWFNE
DAQYWTKATDGKFTSPLMKPGTYTTKVYRNEFPVANGTVVITAGGKATQDIASTESKPSV
IWRIGEFDGRPSELKNGDKIERMHPSDTRMAPWGGEFTVGKSQANEFPMALFSKVGGNAT
VQFDLTADQLQGVTLRVGTTLSFKGGRPNARINDWQAPDPGAPTLIDSRGVTRGAYRGFG
DVYTWDVPAGELKQGANTLTLGVFGNGDKEFLSANYVIDAVELQGKAGAGSP
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctttggagttacctttggtttggcccttctgtgcggaagggtgtttgctgct
tttggcctggaagagtcaaactccacgtacaaagtcgataccgatggcggactcatcttc
gaagtggaccgatcaaacggtgacatcgtcagccttcttttcaatgacgtccagtaccag
gggacgacgaagatgtcccagatcaactccggcttgggctcatcgaccgtcacagccgag
actgtaaacggcatcgtcaagatcaccgtgcaggccgggtcgcagcctctgacgcactac
tatgtggcgaaacccaaagacccgacaatttacatggcgactcacatcaccggcgagatc
aagcccggggagctacgctggcttgcaagacttcagcgcaagcaggtgccgactggagtg
cacggcgacgttgccaacctcgatggatgccaggcgtttgagggcaaagacacgttcaag
tgtccggatggcaccacgaggtgcaagatgtacacgtctgaccggttcatcgatgacaag
gttcatggcgtgacgggcgagggcgtcggcgtctggatgatcatgcccggcaatgcatat
gagcactcctccggtggcccctttatgcgagacatcaactcgcagagcggcggagaccag
gagctgtattggtacatgaacagcggccatgtccgcaccgagccttggcggctcggtctc
ctaggcccctacgcgatgcgcttcacaaccggcgaaaaaccatcggacgacctcgacgtg
tccttcttcgactctttggatatcaaggggtacgtggcggacagcggacgagggagcgtt
tccggtacagcgggcggcgttgcaggtgacttcgagacggtggtccactggttcaatgaa
gatgcccagtactggaccaaggcaaccgacgggaaatttacgtctcctctcatgaagccg
gggacgtacacaacaaaggtgtaccgcaacgagttccccgtcgccaacggcacagtggtc
atcacggccggcggcaaggccacccaagacattgcatcgaccgagtccaagccgtccgtc
atctggcgcattggcgagtttgacgggcggccgtccgagctgaaaaacggcgacaagatt
gagcggatgcatccgtccgacacccgcatggcgccttggggaggcgagttcaccgtggga
aagtcgcaagccaacgaattcccaatggctttgttctccaaggtcggggggaatgccacc
gtccagttcgacctgaccgccgatcagttgcagggagtgactcttcgcgtgggcactacg
ctgtctttcaagggcggccggccgaacgccagaatcaacgactggcaggcgcctgacccc
ggcgctccgacgctgatcgactctcgcggggtgacgcggggcgcttaccgtgggttcggc
gacgtgtatacctgggacgtgccggccggtgagctgaagcagggcgccaacactctcacg
ctgggggttttcgggaacggcgacaaggagtttttgagcgcaaactacgtcattgacgcg
gtcgagctgcagggcaaagcaggagccggcagcccttga
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