Colletotrichum higginsianum: CH63R_06981
Help
Entry
CH63R_06981 CDS
T08176
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
chig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_06981
03015 mRNA surveillance pathway
CH63R_06981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_06981
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CH63R_06981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
28866063
NCBI-ProteinID:
XP_018156734
UniProt:
A0A1B7Y857
LinkDB
All DBs
Position
5:<133686..>134795
Genome browser
AA seq
338 aa
AA seq
DB search
MASASRSPSRDRYRSRTRSLTPMSNRSRSPARRRSYDSRSPSRSRSPTPRRSGRHRTESR
SRSRSRSDSRGRSASPSVRTTKIVVERLTKNINVDHLEEIFGQYGRIKDLHLPINGTRKS
PSSFRLAPMFGLQIHQADVPYLVGTNRGTAYILYETEADAEEAIAHMHEAQLDGTVINVS
IVLPRRKVSPAPPQARRGGGFDPRGPPPGGRGGRGGGGRGAGSFGHNGPRRGASPPPGRF
GPRSDTYRPGSPSRSPTRSPGAAPPSRGGGSRYRSRSRSYSRSPSPPPRRGGGGRGNDRN
RRRRSPSRDSYDSYDSRRSRSPSQSRDRGGRGGGRGYR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcatcgagatcgccttcgcgcgaccgctaccgctcccgcacccggtctctg
acgccgatgtccaaccggtcacgttcgccagcccgccgtcgctcatacgattcacgctcc
ccgtctcgttctagatcacccacgccgcgacgaagtggcagacacagaacggagagtcgc
agccgcagccgcagtcgtagcgatagccgaggacgctctgcgagcccctcagtgaggact
accaagattgttgtcgagcgtctgaccaaaaatatcaacgtcgaccacttggaggaaatc
tttggccaatacggacgtattaaagacctccatcttcccatcaacggaacacgtaagtcg
ccctcgagtttccgtctggcccctatgttcgggctacaaatccaccaagctgacgttcct
tatttagttggcaccaaccgcggcaccgcgtacatcctctatgaaaccgaagccgatgcg
gaggaagccattgcccacatgcatgaggcacagcttgacggcaccgtaatcaacgtctct
atcgttctccctcgacgcaaggtttccccagcacctccccaggcccgtcgtggcggaggc
ttcgaccccagaggccctcccccaggaggtcgtggtggtagaggcgggggagggcgaggg
gctggctctttcggccacaacggccctcgacgaggcgcgtcgcccccgcctggtcgattc
ggtccccgatcagacacataccggcctggttcgccgtcgcgttctccgactcgatcccct
ggtgccgctccgccgtccaggggtggtggaagcagatatagaagccgttccagatcctac
tccagatctccttcaccacccccgagacgtggcggcggtggtcgaggtaacgaccgtaac
cgccggagaaggagcccgagccgagacagctacgatagctacgacagccgtcgatcccgg
tctccaagccaatcccgcgaccgtggcggtcgcggaggcggccgcggataccgatga
DBGET
integrated database retrieval system
