Colletotrichum higginsianum: CH63R_07065
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Entry
CH63R_07065 CDS
T08176
Name
(RefSeq) Nucleoporin nup44
KO
K14308
nuclear pore complex protein Nup54
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_07065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_07065
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_07065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Adhesin_P1_N
Rx_N
DivIVA
YliH
CDT1_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
28866147
NCBI-ProteinID:
XP_018156818
UniProt:
A0A1B7Y8J0
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All DBs
Position
5:421420..422642
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AA seq
363 aa
AA seq
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MSLFGAPKPAGQTGGLFGGGGFGSTLGQSTQQQQQQPQQQQQGNQQQGGLSLFGQTQNQS
NAFGNSFAQSQQPQQQQQQQQQQQQQQQQQQMPSLSQSQAQLSSSLWQPGRDTPQSQKPI
PEQMALIFEKWNPTNPNCAFKHYFYNKVDEASVPFYKPGPHEDPKEWEEALQKKPAPGYI
PVLCTGFSGVAARLQTQKKVVGELNVRLHQINASLDAILSRHDLETSVRALAARRRHVVL
RERCLALAARVQVLRNRGYALSGDEDDLRLKLVELERNVQDPALAAREEELWSRLIVLRD
YADQLMKETSKPAFASGEGLSEETEHKTKKVLEDYEKQIQHLKKEVESITKAFADWEKER
NPS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcggagcaccgaagcccgcagggcagactgggggcctcttcggcggtggt
ggattcggcagcacgctgggacagtcgacacagcagcagcagcagcaaccgcagcaacag
cagcagggaaaccagcagcaaggtggtctgagtttgtttgggcaaacgcagaaccagtca
aacgcctttgggaactcgtttgcccagtctcaacagccccaacagcagcagcaacaacaa
caacaacagcagcagcagcaacagcagcagcagatgcccagcttgtcacagtcgcaagca
cagctttcaagctccctctggcaacccggcagggacacacctcagagccagaagcctata
cccgaacaaatggccctcatcttcgagaagtggaaccccacaaaccccaactgcgccttt
aagcactacttctacaacaaggtcgatgaggcgtcggtccccttctacaaacccggcccg
cacgaagatcccaaggaatgggaggaggcgctgcaaaagaagcctgcgccgggctacatt
ccggtcctctgcacaggattctcgggcgttgcggcgcgcctccagacgcagaagaaggtt
gtcggggagcttaacgtgcgcctgcaccagatcaacgccagcctggacgcaattctctcg
cggcatgacctcgagacgagcgtgcgcgcgctggcggcccgccggcgccacgtcgtgctc
cgcgagcggtgcctcgccctcgccgcgcgtgtgcaggtgttgcgcaaccgtggctacgcc
ctcagcggcgacgaagacgacctgcggctcaagctggtggagctcgagcgcaacgtgcag
gaccccgcgctggcggcgagggaggaagagctctggagccggctgatcgtgctccgggac
tacgcagaccagcttatgaaggagaccagtaagcccgcgttcgcgagcggcgagggttta
agcgaggagacggaacacaagacgaagaaggtcctggaagactacgagaagcagatccag
cacctcaagaaggaggtcgagtcgatcacaaaagcctttgctgactgggagaaggagcgg
aacccgagctga
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