KEGG   Colletotrichum higginsianum: CH63R_07249
Entry
CH63R_07249       CDS       T08176                                 
Name
(RefSeq) Ribosomal assembly complex component
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
chig  Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:chig00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:chig03009]
    CH63R_07249
Ribosome biogenesis [BR:chig03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    CH63R_07249
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 EIF3I Beta-prop_EML_2 WD40_WDHD1_1st NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_VPS8 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_LRRK2 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IP5PC_F Beta-prop_IFT140_1st WDR54 Beta-prop_SPT8 PQQ_2
Other DBs
NCBI-GeneID: 28866331
NCBI-ProteinID: XP_018157002
UniProt: A0A1B7Y901
LinkDB
Position
5:1054867..1056260
AA seq 441 aa
MLSEEFYSSICGPPIAANTAVSKDVGIYAHTLSPSYAVKSTLKKSAAPPNCLAVGDSHVF
AAQHEKSQVHVYSRSRGIQETTVTFPERIRSLALIGDVLALGTSEGRLMLWETCTGRQLT
TPPCHVQAVSCLAVTPHHILTGSQDSNIHVWTLSRLLELNASIDSEPDRTLSNHRAAITS
LAISQSVNPETNLCVSSSKDKTCIIWNYQTGEVLRTLLFPAAPLCVSMDPCSRAVFVSSE
DRSLYLVELLGEKPLIGPNSAESSSTVVQVTSPIGIADEDAGPASCLALNYDGTTVLSGH
TRGKILQWQLTENSHPTELTDLNASVTNLVFPPLLQAPRSTKPAAVIKPAQAERQYTFTS
QLNTSLEQETRFARMLNGFGVPSDMLESAVLSFQEVQAQPPTEEDDETQQHTDELWDIIN
EQRALQKLAMQPYLEAKSART
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgttgtccgaagagttttactcgtccatctgcggcccgcctattgcggcaaacacggcc
gtttccaaggatgtcggcatctatgcccacacgctcagccccagctacgccgtcaagtcg
acgctcaaaaaaagtgcagctccgcccaattgtctggccgtcggcgactcgcacgtcttc
gccgcccagcacgagaagtcccaagtccatgtctactcgagatcgcgcggcatccaggaa
acgactgtcaccttccccgagcgcatccgcagcttggcgttgataggcgatgtcttggcg
ttagggacttccgaaggcaggctgatgttgtgggagacgtgcaccggccgccagctgacc
acgccgccctgccatgtccaggccgtttcgtgtttggccgtcacaccccatcacatcctc
accggctcccaagactccaacattcatgtgtggacgctgtctcgtctcctggagctaaac
gcctccattgacagtgagcccgaccgcaccctctccaaccatagggctgccatcacctcg
ctcgccatcagccagagtgtcaacccggaaaccaacctctgcgtctcgtcgagcaaagac
aagacttgcatcatctggaactatcaaacgggtgaggttctgcgcactctactgttcccc
gcggctccgctctgcgtttccatggatccctgctctcgtgccgttttcgtttcatccgag
gacaggtccctttacctcgtagagttgctcggcgagaagccgctcattggccccaacagc
gctgaatcatcttcgactgttgtgcaagtcacctcaccaattggcatcgccgacgaagac
gctggcccggcctcgtgcttggcactgaactatgatggcaccacagttttgtccggccac
accagaggcaagatcttacaatggcaattgacggagaacagccaccctacagagttgact
gatctcaatgcctctgtaacaaacttggtgtttccgccgctgctgcaagcaccccgatcc
acaaaacctgctgcagtcattaagcccgctcaggccgagcggcagtacacttttacgtct
cagctgaacacgagcctcgaacaagagacgaggtttgccaggatgctcaatggctttggc
gtgcccagcgatatgctggagtcggccgttctctcgttccaggaggttcaggcacaacct
cctacggaagaagacgatgagacgcagcagcataccgacgagctgtgggacataatcaac
gagcaaagggcattacagaagctggctatgcagccgtatctggaagccaaatcggctcgt
acctga

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