Colletotrichum higginsianum: CH63R_07253
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Entry
CH63R_07253 CDS
T08176
Name
(RefSeq) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CH63R_07253
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CH63R_07253
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GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
28866335
NCBI-ProteinID:
XP_018157006
UniProt:
A0A1B7Y9F9
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Position
5:complement(1064995..1066943)
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AA seq
580 aa
AA seq
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MRTSLFVAALGGLVSNALAAPTQAEPFLTQIDNQTWIIGNDVWNMTQGLKYGVKLNYKNR
DLVGNAVGHYVSYNGAANDIAWTSASIAKKGTHEGKPFIDVKFTSIDGDFHWVIFQGLAG
AYQYFVNHNLPTLGEFRTLWRLDNTTFPNGKTDLHDKPLPPLSDYLPENKVQDETWRTPD
GSGYITKYDFSDFIRTQKYYGVYGDEVGSWYINAGKDYYNGNHLKQELMVHRESATGDAV
QLNMIHGTHFQVSAVDVFPDGKMWGPWLWYLNDGSKSDAESRAASEFAAWPYPWLDDAAY
HSRGTVKGKLLLSDGRPAAGAAVFLGDNRPTKTALDMGSDYYYTAYADDQGAFEIPHIRT
AANGYALQAWSNGGALADVTTQLLFNDVDVADAQTTDLGTLAWAVSDRKRLFQVGEFDRT
SLGFAHGGDPYFGHAIIASCPANIVFRAGCSKPSDWCYGQTHRGNYTISFRIGELPSPAP
ETANLIVSLAGYSTGTSSVVLANGRQVGNLTSGAVGADSTSGLLNDPSVYRSATAAGEWR
LFQFPVPGALLKQGENEVTFQLTRNTTWRGFIWDSIVLEW
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccagtctcttcgtcgccgccctcgggggtctcgtctccaacgcactcgccgca
ccaacccaggcagagcctttcctcacccagattgacaaccagacgtggatcatcggcaac
gatgtctggaacatgacccaaggcctcaaatacggcgtgaagctcaactacaagaaccgc
gaccttgtcgggaacgccgttggccactatgtcagctacaacggcgccgccaacgacatc
gcctggacctcggccagcatcgccaaaaagggcactcacgagggcaaacccttcatcgac
gtaaagtttacctctatcgacggcgacttccactgggtcatcttccaggggctcgctggc
gcctaccagtacttcgtcaaccacaacctgcccacgctgggcgagttccgtaccctctgg
cgcctcgacaacacgacgttccccaacggcaagacggacctccacgacaagccgctgccg
ccgctcagcgactacctgcccgagaacaaggtccaggacgagacctggcgcacgcccgac
ggctccggctacatcacgaagtacgacttttccgacttcatccgcacccagaagtactac
ggcgtctacggcgacgaggtcggcagctggtacatcaacgccggcaaggactactacaat
ggcaaccacctgaagcaggagctcatggttcaccgtgagagtgctaccggcgacgccgtg
cagctcaacatgatccacggcacccacttccaggtctctgccgtcgatgtcttccccgac
ggcaagatgtggggtccctggctctggtacctgaacgacggctccaaatccgacgccgag
tcccgcgccgcctccgaattcgccgcctggccctacccctggctcgatgacgctgcctac
cactctcgcggcaccgtcaagggcaagctcctcctgtccgacggccgccccgccgccggc
gccgccgtcttcctcggcgacaaccgtcccaccaagacagccctcgacatgggctccgac
tactactacaccgcctacgccgacgaccagggcgccttcgagatcccgcacatccgcacc
gccgccaacggctacgccctgcaggcctggtccaacggcggcgccctcgccgacgtgacg
acgcagctgctcttcaacgacgtcgacgtcgccgacgcccagaccacggacctgggcacc
ctcgcctgggctgtctctgaccgcaagcgcctcttccaggtcggcgagttcgaccgtacc
tcgctcggcttcgcccacggcggcgacccctacttcggccacgccatcatcgcctcgtgc
ccggccaacatcgtcttccgcgcgggctgctccaagccgagtgactggtgctacggccag
acccacaggggtaactacaccatcagcttccgcatcggcgagctcccctccccggcgccc
gagacggcgaacctgatcgtctcgctggccggctactcgaccggcacgagtagcgtcgtc
ctcgccaacgggcggcaggtcggcaacctcacgagcggcgccgtcggcgccgactccacc
tcgggcctactcaacgacccgtccgtctaccgcagcgccacagccgccggcgagtggcgc
ctcttccagttccccgtccccggcgcgctgctgaagcagggcgagaacgaggtcacgttc
cagctgacgcggaacacgacctggaggggtttcatctgggacagcatcgtcctggagtgg
tga
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