Colletotrichum higginsianum: CH63R_07389
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Entry
CH63R_07389 CDS
T08176
Name
(RefSeq) Polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Module
chig_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_07389
Enzymes [BR:
chig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
CH63R_07389
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
28866471
NCBI-ProteinID:
XP_018157142
UniProt:
H1VRR9
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Position
5:complement(1493428..1494999)
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AA seq
447 aa
AA seq
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MVAPTLLGGLFAAAAAAALIPLTHAAGTSSAAPERPDIKPAPFHPGRPFPASAPRTKTCA
VKAGANGSDDATAIFQAFKNCNNGGTVVLDSVYNVCSPLDLTFLNAVDVAITGTVNFCDD
IDHWLPRTFKYTFQLSSSMWKFGGKDVNIYGNGVGTLNGNGQKWYDRFASNATLERPILL
VTDGLHGGSITGLNMVNSPQWFNLIANSTDVLISDITIKVGSTSKNPAKNTDGWDTYRSD
SVVIQNSHIDNGDDCVSFKPNSTNIVVQNLVCNGSHGISVGSLGQYVGTFDIVENLYVYN
TTMSNASDAARIKVWPGIDTPFQPSLSGGGGSGYVKNVTYDGFHQSNNDNAITIDQCYGQ
KNQTLCNEYPSNMTISDIYFKNFDGTASSKNDPRVGTLVCSSPSKCVNINASKINIKTPS
GKNPQWLCVNLDTGLLDINCVTKVTKG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggttgctccgaccctcctcggtggcctcttcgccgccgccgccgccgccgcccttatt
ccccttacccacgccgcagggacctcgagcgccgcccccgagcgcccagacatcaagccc
gcaccctttcacccgggccgccccttcccggcctcggccccgagaaccaagacgtgcgcc
gttaaggccggcgccaacggcagcgatgacgccaccgccatcttccaggccttcaagaac
tgcaacaacggcggcaccgtcgtcctcgactccgtctacaacgtctgctcgcccctcgac
ctgacctttctgaacgccgtcgacgtcgccatcaccggcaccgtcaacttttgcgatgac
attgaccactggctgcctcgcacctttaagtacaccttccagctgtcgtcgtccatgtgg
aagtttggcggcaaagacgtcaacatctatggcaacggtgtcggcacgctcaacggaaac
ggccagaaatggtacgaccgattcgcctccaacgccaccctcgagaggcccatcttgctt
gtcaccgatggcctgcacggaggctccatcaccggcctgaacatggtcaactcgcctcag
tggttcaatctcatcgccaacagcaccgacgtgctcatctcggacatcaccatcaaggtc
ggctcgacctccaagaacccggccaagaacacggacggctgggacacgtaccgctccgac
tcggtcgtcattcaaaattcccacatcgacaacggcgacgactgcgtctccttcaagccc
aactcgacaaacatcgtcgtccagaacctcgtctgcaacggctctcacggcatctccgtc
ggctcccttggccagtacgtcggcacctttgacatcgtcgagaacctttacgtctacaac
actaccatgtccaacgcctccgacgctgcccgcatcaaggtctggcccggcatcgacacc
cccttccagccctcgctctcgggcggcggcggctcgggctatgtcaagaacgtcacctac
gacggcttccaccagtccaacaacgacaacgccatcaccattgaccagtgctacggccag
aagaaccagaccctgtgcaacgagtacccgtccaacatgactattagcgatatctacttc
aagaactttgacggcactgcctcctccaagaacgatcctcgcgtcggaactctcgtatgc
agcagcccctcgaaatgcgtcaacatcaacgcctccaagatcaacatcaagaccccgagc
ggcaagaaccctcaatggttgtgcgtcaacctggacaccggcctcctcgacatcaactgc
gtgaccaaggtgaccaagggctag
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