Colletotrichum higginsianum: CH63R_07477
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Entry
CH63R_07477 CDS
T08176
Name
(RefSeq) translation elongation factor EF-1 alpha
KO
K03231
elongation factor 1-alpha
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_07477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_07477
03016 Transfer RNA biogenesis [BR:
chig03016
]
CH63R_07477
03012 Translation factors [BR:
chig03012
]
CH63R_07477
04131 Membrane trafficking [BR:
chig04131
]
CH63R_07477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_07477
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CH63R_07477
Transfer RNA biogenesis [BR:
chig03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CH63R_07477
Translation factors [BR:
chig03012
]
Eukaryotic type
Elongation factors
CH63R_07477
Membrane trafficking [BR:
chig04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
CH63R_07477
Exosome [BR:
chig04147
]
Exosomal proteins
Proteins found in most exosomes
CH63R_07477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
28866559
NCBI-ProteinID:
XP_018157230
UniProt:
A0A1B7Y9I0
LinkDB
All DBs
Position
5:1789196..1790839
Genome browser
AA seq
460 aa
AA seq
DB search
MGKEEKAHINVVVIGHVDSGKSTTTGHLIYQCGGIDKRTIEKFEKEAAELGKGSFKYAWV
LDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAG
TGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDTTKWSEARYEEIIKETSSFIKKV
GYNPKTVAFVPISGFHGDNMLAPTTNAPWYKGWEKETKAGKSSGKTLLEAIDSIDQPKRP
TDKPLRLPLQDVYKIGGIGTVPVGRIETGVLKPGMVVTFAPANVTTEVKSVEMHHEQLTE
GLPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPAGAASFNAQVIVLNHPGQVGAGYAPVL
DCHTAHIACKFSEILEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPL
GRFAVRDMRQTVAVGVIKSVEKASAAAGKVTKSAAKAAKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaagagaaggctcacatcaacgtcgtcgttatcggccacgtcgattccggc
aagtcgaccaccactggtcacttgatctaccagtgcggtggtatcgacaagcgtaccatc
gagaagttcgagaaggaggctgctgagctcggcaagggttccttcaagtacgcgtgggtt
cttgacaagctcaaggccgagcgtgagcgtggtatcaccatcgacattgccctctggaag
ttcgagactcccaagtactatgtcaccgtcattgacgcccccggtcaccgtgacttcatc
aagaacatgatcactggtacttcccaggccgactgcgccattctcatcattgccgccggc
actggtgagttcgaggctggtatctccaaggatggccagactcgtgagcacgctctgctc
gcctacaccctcggtgtcaagcagctcatcgttgccatcaacaagatggacaccaccaag
tggtctgaggcccgttacgaggagatcatcaaggagacctcctccttcatcaagaaggtc
ggctacaaccccaagactgttgccttcgtccccatctccggtttccacggcgacaacatg
cttgcccccaccaccaacgctccctggtacaagggttgggagaaggagaccaaggccggc
aagagctccggcaagactctccttgaggccatcgactccatcgaccagcccaagcgcccg
acagacaagcccctccgtcttccccttcaggatgtctacaagatcggcggtatcggcact
gtgcccgtcggccgtatcgagactggtgtcctcaagcccggcatggtcgtcaccttcgcc
cctgccaacgtcaccactgaagtcaagtccgtcgagatgcaccacgagcagctcaccgag
ggtctccccggtgacaacgttggtttcaacgtgaagaacgtttccgtcaaggacattcgc
cgtggcaacgtcgccggtgactccaagaacgacccccctgccggcgctgcctccttcaac
gcccaggttatcgtcctcaaccaccccggtcaggttggtgctggctacgcccccgtcctc
gactgccacactgcccacatcgcctgcaagttctccgagatcctcgagaagattgaccgc
cgtaccggaaagtccgttgagaacaaccccaagttcatcaagtctggtgacgccgccatc
gtcaagatggttccctccaagcccatgtgcgttgaggctttcaccgactacccccctctg
ggacgtttcgccgtccgtgacatgcgtcagaccgtcgctgtcggtgtcatcaagtccgtc
gagaaggcttccgccgctgccggcaaggtcaccaagtctgctgccaaggctgccaagaaa
taa
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