Colletotrichum higginsianum: CH63R_07601
Help
Entry
CH63R_07601 CDS
T08176
Name
(RefSeq) WD repeat-containing protein
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_07601
Membrane trafficking [BR:
chig04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
CH63R_07601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
zf-RING_16
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
RWD
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
28866683
NCBI-ProteinID:
XP_018157354
UniProt:
A0A1B7Y9V7
LinkDB
All DBs
Position
5:complement(2325825..2330545)
Genome browser
AA seq
1548 aa
AA seq
DB search
MPHFDQLDAPKKGKPIKSAFDSESFDADGTIHVAGLVGSATISPSGRDVALASPEGLSII
DLDSPYNPPRRLSSHGSPWLVTDVQWSPFAARDYWVVSTANHRALVWNLNLRDDSTSGAI
EHSLQGHSRAITDINWSAHHPDQLASCAVDGYVHCWDLRRPRQPVLTFCDWFAGATQVKY
NRQDPHILASSHDRWLHIWDERRSCEPLKSISAHTSKIYGIDWNRTRSTGIVTCSLDKHI
KFWDYGSDQDVPERVIRTEFPVWRARHTPFGRGLLAMPQNEPGDLYLYDRRPPPKDPEEG
PTDPVAVFPGHGNHKAKEFLWRSRGGITEDGLDERDFQLVSWGEDNELRLQQVDPSILES
VGYVKGMPARKNLVLTRKGAAYKTFRTAEDSVSRDRRTATMSDPRNGAQYRQSALTMGMR
SGPTTYSKLGAAWKGSSMKAKSASREMDRSQAHIGWIKGILINKRKTSTDSPRRADSKDS
SMFSPGYMDDDKWGDPETIQEEFLRISMQLPKVEWEHIDMDNLTLKASLNGPWGANGETI
FIKVTVDIPADYPKFKAPKFLIEKTGFMSERTHKKIGHEIHELCQQFLERKQNCLDVAFS
YLLGEIDLAASTNFFKNVKDLDDPLDGVGSESSSEDENDIPAGGSASMSQELPPNVEAES
TLAPNNTTIPPLPRFCGARFANDGRLVCFFPTKEEKARALFSTSIEPPRERIKGEPVFAG
FGRLAHDSPPGKRYGNDEMSATDDQSDSDGSTGSSSSSDSESTSINKMSLWYQPRHRFKR
TWSDNRSIRSSGGGTGVGTGTGTGSLRRRPGAKSKNVISLHDISGLLPAKKEFAQEYAIF
GDGAQVCEHNAQVAKKHGCQDLVDIWRYLSLILRRDIPLELSNMDPRQNSILIIARNALA
RFRHEDSPDAQTVNDNDDSTVFSGRVKWGNHPLARGFISDLFEYFEMTADIQMLAMLSCI
FSEAFTEDSVAYAESHLTQPDTPLPMKTPAFSLDYFPTDASLWNLSGRSQTNSAITTPRT
LHTPIRYSGSQGSTEEVFWAGDPGSNSYSCGETPPNRGVKEYLGDGDQTQSLSTSPSGRT
LSRANSGLTSSFAINFPRPFSGVATGTTTAASSPPNHGRKRLSPADTVLSTLAPSASAVG
NVTWGHSTVMGDSITTRTSLSDDEVYREELFSLVPIGVSVHLEDQTIFDDDGWMTTPLLE
PSRSDMYATYRYVYAEILQMWNQPLARLEIMKFNVLQQNQGAGALDEFHETYSVADTSTT
VQQQQQQQHHHHPEQQHQALQPQQPHNTSPILLGKKEQLQALVASGRGLDVTGVCRVHET
QLEPLKYTSATATRLGGAVGSCDRCRRTQNQLLCVYCREPVDALYPPCLGCGCAFHDACL
AEWHAAGEIMCPAGDECNCVEEASMGQVESWAAMMGALRKGQQAAAASSATFAASGGIMG
RGFVLPPPAIEEPGEEDRGDWESVGSSAGIPSRVQGGGAGGSAAVMSAARISLGNRLKKS
AGDTAAAWSRASSLRRGRGGGGVGAGGAGAGAGVNGNGSAGGSWRNPR
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacttcgaccagctcgacgctccgaaaaagggcaagccgatcaagtctgccttt
gacagtgagagcttcgacgccgacggcacaattcatgttgccggactagtgggatcggcc
acaatctcaccttctggtagagatgtcgcattggcatcccccgagggcctgtcaatcatt
gacttggactcgccctacaaccctccccgccggctcagcagccacggctctccgtggctt
gtcacggatgttcaatggtcgcctttcgcagcccgcgactattgggtcgtctccacggct
aatcaccgtgcgctcgtgtggaatctcaacctgagagacgactcaacgtccggggcgatc
gagcattccctccagggccacagcagggccatcaccgacatcaactggtccgcacaccac
cccgaccagctcgcgtcgtgcgcagtcgatggttacgtccattgctgggatctcaggcgt
ccgagacagcctgtcctcaccttctgcgactggtttgccggcgccacacaagttaagtac
aaccgtcaggacccgcacattctggcctcgtctcacgacaggtggttgcacatctgggac
gagcgccggtcatgcgagcctctcaagtccatcagcgcccatacctccaagatttacggc
atcgactggaaccggaccaggtctacgggcatcgtgacatgctccttggataagcacatc
aagttctgggactacggcagcgaccaagacgtcccggagcgtgtcatacgcaccgagttc
ccggtgtggcgggctcgtcacaccccctttggccggggcctcctggcgatgcctcaaaat
gaaccaggcgatctatacctgtacgaccgacgaccgcctcccaaggaccctgaggaaggg
ccgacggatccagtcgcggtgttccccggacacggcaaccacaaggccaaggagtttttg
tggagaagtagagggggtatcacagaggacgggttggacgagagagacttccaactggtc
tcttggggtgaggacaatgagctgcggttgcagcaggtcgacccgtccattctcgaatct
gtgggctacgtcaaaggaatgccagcgagaaagaacctggttctcacacgtaaaggtgcc
gcctacaagactttccggacggccgaagatagcgtcagccgagaccggaggaccgcgacg
atgagcgatccccgaaacggcgcgcagtatcgacagagcgccctgaccatgggcatgcgc
tcagggccgacgacctactccaaacttggtgccgcttggaagggttcctccatgaaagcc
aagagcgcgtccagggagatggatcgcagccaggcgcatatcggttggataaaaggaatc
ttgataaacaagagaaaaacctctactgacagcccccgacgggccgactcgaaggactcg
agcatgtttagtcccgggtacatggacgacgacaagtggggggacccggagaccatccag
gaggagtttcttcgcatcagcatgcagcttcccaaggtggagtgggagcacatcgacatg
gacaatttgacgctcaaggcctcccttaatggcccatggggcgccaatggcgaaaccatc
tttattaaggtgacggtcgacataccggcagactaccccaaattcaaggccccgaagttc
ttaatcgagaagacgggtttcatgtcggagaggacgcataagaagattgggcacgagatc
catgagctctgccaacagttcctagagcggaaacaaaactgcctggatgttgctttctcc
tacctcttgggcgagattgaccttgcagcgagcacgaacttcttcaagaacgtgaaggac
ctcgatgacccgctggacggagtcggctccgagagctccagcgaggacgagaacgatata
ccggcgggcggctccgcgtccatgtcgcaggagctgcctcccaatgtcgaagccgaaagc
actcttgcaccgaataacactactatcccaccgctgccacgattctgcggcgctcggttt
gccaacgacgggcggcttgtgtgcttcttcccgacaaaagaggaaaaagctcgggcattg
ttttctacgtcaatcgagcccccgcgcgagcggataaagggcgagccggtgtttgcgggc
ttcggtcgtctggcgcacgattcgccgccgggcaagagatacggcaacgatgaaatgtcc
gcgacagatgaccagtcagactctgacggttccacggggtcttcgtcgtcgagcgactcg
gagtcaacgtccatcaacaagatgagcctatggtaccagccccgccatcggttcaagagg
acctggagcgacaaccggtcaatccggtcaagcggcggcggtacgggagtggggaccggg
accggcacggggtctctcagaaggcgccccggggccaagtcgaagaatgtcatatccctc
cacgatatctcaggccttcttcccgcgaagaaggaattcgcccaagaatacgccatattc
ggggacggagctcaagtctgcgagcacaacgcccaagtcgcgaagaagcacggctgccag
gatctggtcgacatctggcgctacttatcgttgatcctccgcagagacatcccactggag
ctgtcgaacatggacccccgccaaaactcaatactgatcattgcccgcaacgcccttgcg
cgcttccgccatgaggactcgccggatgcgcagactgttaacgacaacgacgacagcacc
gttttcagcggaagggtaaaatggggcaatcatcccctggcaaggggcttcatcagcgac
ctcttcgagtactttgagatgacggcggacatccagatgttggccatgctttcctgcatc
ttcagtgaggccttcaccgaggatagcgttgcgtatgccgaatcacatctcacacagccc
gacacgccgttgccgatgaagacgcccgcgttctcgctcgactacttccctacggatgca
tcgctctggaacctcagtgggagaagccaaacgaactcggccatcaccactccaaggacg
ctgcacacgcctatccgctactccggctcccagggatccaccgaggaagtgttctgggct
ggcgatccaggctccaactcgtactcttgcggcgaaaccccgcccaataggggagtcaag
gagtacctcggcgacggtgaccagacacaaagcctttcgacatcgcccagcggacggacg
ctgtcgagggcgaactcggggctgacgtcgagtttcgccatcaacttcccccgtcctttc
agcggtgtcgcgacaggaaccacgaccgccgcctcgtcgccaccgaaccacggccggaaa
cgcctcagtccggccgacacagttctcagcaccctcgctcccagtgccagcgcagtcggc
aacgtcacctggggccactcgaccgtcatgggcgactctatcacgacacgcacctctctc
tcggacgacgaggtctaccgcgaggagctcttctcgctcgtccccatcggcgtgtccgtg
catctggaggaccagacgatcttcgacgacgacggttggatgacgacgccgctcctcgag
cccagccgcagcgacatgtacgccacgtaccgctacgtctacgccgagatcctccagatg
tggaaccagcccctggcgcgcctggagattatgaagtttaacgtgctccagcagaaccag
ggggccggggcgctcgacgaattccacgagacgtatagcgtcgccgacacttcgaccact
gtacagcagcagcagcagcagcaacaccaccaccaccccgaacagcagcaccaggccctc
cagccgcagcaaccgcacaacacctcgccgatcctgctcggcaagaaggagcagctccag
gccctcgtcgcctctggccgcggtctcgacgtgacgggcgtctgccgcgtccacgaaacg
caactcgagccgctgaaatacacctcggccacggcgacgcgtctcggcggcgctgtcggc
tcctgcgaccgctgccgccgcacgcagaaccagctgctctgcgtctactgccgcgagccc
gtcgacgcgctgtacccgccctgtctcggctgcggctgcgccttccacgatgcgtgcctc
gccgagtggcacgccgcgggcgagatcatgtgccccgcgggcgacgagtgcaactgcgtc
gaggaggcgtccatggggcaggtcgagtcgtgggccgcgatgatgggggcgttgaggaag
ggtcagcaggccgccgccgcgtcgtccgccacgtttgctgcgtcgggagggatcatggga
cgggggttcgtgctgccgccgcctgcgatcgaggagcccggggaggaggacaggggcgac
tgggagagcgtggggagctccgcggggatcccgagccgcgtgcaaggcgggggtgcgggg
ggtagcgccgccgtcatgagcgccgcgagaatcagtctgggcaacaggttgaagaagtcc
gcgggcgacaccgcggccgcgtggtcccgcgcttcgagcttgaggagagggaggggcgga
ggaggggtcggggccgggggggctggggctggggctggggtcaacgggaacgggagcgcc
ggtgggagctggcggaacccgaggtga
DBGET
integrated database retrieval system