Colletotrichum higginsianum: CH63R_07663
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Entry
CH63R_07663 CDS
T08176
Name
(RefSeq) Transcription factor SPT8
KO
K11360
transcriptional activator SPT8
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_07663
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_07663
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CH63R_07663
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CH63R_07663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
28866745
NCBI-ProteinID:
XP_018157416
UniProt:
H1UZP3
LinkDB
All DBs
Position
5:complement(2564643..2566859)
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AA seq
698 aa
AA seq
DB search
MDDDDRDSNASSENDQNDQNDQNDQDEVMEDVDDAEGDMENDEEDNDDDQDENEREETGD
DAQEKGDEAAKQEDAREPSRAGSASARASPDGKGKSPMPFSDLFPTVRPEAVRARLYDIV
PTMAAPQATSINAIAITPDLRYWMTGGSDGYIRKYDGPGTINGKQLLTVAQRHPFVDSVV
KAGILMSYWENEEPGPPNPRGNEEHVLSPVYSLAVHSQALWLLSGLESGGINLQSVRHDE
GKRITCLQQHTNAVSVLTLSQDEKSVLSGSWDKNIYDWDLNTGGVKRSFDGSGGQISAIE
LRPVNGAPIPAEAMEEEIKFDPTFTSNNGKPLRNSTVDAPNGGDALAPATSGEIAEGQAS
PAHESLFGGSDTGSLFGDNVPGNYGADGDDDDEFSRAMGDMGMPPLHDGSGQDGGMDHSA
DIDMTNAFNADSASAPAVQAPGSVSPDASRHQPLASGPDTAATDGPLVQDGATDAEAQPP
VPDVSETAPVPDTQADEPAPGSPSMVFVSEPAVPAMDPTQSADTIFFSAAIDGTIRLWDR
RVQDPVARISNQRGVPPWCMGACWSPDGNWIYAGRRNGTVEEYSIHKAKSGWETERVLKF
PAGSGAVSAVRAMPNGRHLVCASHDILRLYDLKDTRAFKHSTVPFLIIPGPPRAGVISSL
YIDRTCRFMLSAAGTRGWEGTSTEVLIGYEIGVTEEKS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatgatagagattccaacgcgagttccgaaaatgaccagaacgaccaaaac
gaccagaatgaccaggacgaggtcatggaagacgtagacgatgccgagggggacatggaa
aacgacgaagaagacaacgatgatgatcaggatgaaaacgaacgcgaagaaacgggagac
gatgcgcaagagaagggcgatgaggcagcaaaacaggaagacgccagagagccttccaga
gccggatcagctagcgcgcgggcatccccagatggcaaaggcaaatcaccaatgccgttc
tcggatcttttcccgaccgtacggccagaagctgtcagggcccggctgtacgatatcgtc
cctacgatggccgccccgcaggcaacgagcatcaacgccatcgccatcacgcccgacctt
agatactggatgactggaggctcggacggctacatccgaaaatacgacggcccgggtaca
atcaacggtaaacagctcctgacagttgcacagcggcacccctttgtcgatagtgtcgtc
aaggcgggcattttgatgtcatactgggagaacgaagaaccgggcccacccaaccctaga
ggcaacgaggagcatgtgctatcgcccgtgtattccttggccgttcactcacaagcattg
tggcttctatctggtttggagtctggcggcatcaaccttcagagtgtaagacatgacgaa
ggaaagcgcatcacatgcctgcagcaacacaccaatgccgttagcgtcttgacactgtca
caagacgagaagagcgtgttgagcggcagctgggataagaacatctacgactgggatctg
aatactggaggtgtgaagcggtcgtttgacggtagcggaggtcaaatttctgccattgag
cttcgtcccgtcaacggagcccccattcccgccgaggcgatggaggaggaaatcaagttt
gacccgactttcacatcgaacaacggcaagcccttgcggaacagcactgtggatgctccg
aacgggggtgatgcattggcgcctgccacctccggcgagattgcagaagggcaggcatcg
cccgcacacgagtcgctcttcggtggtagtgacactgggtctctcttcggcgataatgta
ccgggcaactatggtgctgatggtgatgatgacgacgaattttcaagggccatgggtgac
atgggaatgccgcctcttcacgatggctcaggacaggatgggggaatggaccattctgcc
gacatcgacatgacgaatgcattcaacgctgactcggcctcggcaccggcggttcaagct
ccgggaagcgtcagcccagacgcttcaagacaccagcctttggcatcaggtccagacacc
gcggcaaccgatggccccttggtccaggacggtgcaaccgatgctgaagcacagcctcct
gtccccgacgtctccgagaccgctccggtgcccgatacgcaggcggatgaaccagcaccc
gggtcgccgtctatggtattcgtgtcggagcccgccgtcccagccatggaccccacccag
tcggccgacacgatcttcttctccgcagccatcgatggtacgatcaggctgtgggaccgt
cgcgtgcaggaccctgttgctaggataagcaaccagcggggtgtgcccccttggtgtatg
ggtgcctgctggagtccagatggcaactggatctatgctggcaggcgaaacggaacagta
gaagagtacagcatccacaaagctaagagcggctgggagacggagcgggttcttaagttc
ccggccggtagtggagcagtgagcgcagtgcgagccatgccgaatggtcgacatctggtc
tgtgcctcgcatgacattcttcggctgtacgacctcaaagacacgcgggccttcaagcac
tcgacggtccccttcctgattattcctggccccccacgtgccggtgtcatttcgtctctc
tacattgaccgcacatgtcgctttatgctctcagctgccggaacacgtggttgggaaggc
acaagcaccgaagtccttataggttatgaaatcggcgttaccgaagagaagtcatga
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