Colletotrichum higginsianum: CH63R_07674
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Entry
CH63R_07674 CDS
T08176
Name
(RefSeq) Pre-mRNA-splicing factor slt-11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_07674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_07674
Spliceosome [BR:
chig03041
]
Complex B
Other components
Prp19-related factors
CH63R_07674
Complex C
CH63R_07674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_occluded
RRM_YTH1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
28866756
NCBI-ProteinID:
XP_018157427
UniProt:
A0A1B7YA22
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Position
5:complement(<2604274..>2605498)
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AA seq
385 aa
AA seq
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MPPQIKQDLNRSGWESTDFPSVCENCLPENPYVKMLKEDYGAECKLCTRPFTVFSWSADR
AHGRKKRTNICLTCARLKNCCQACMLDLSFGLPIVVRDAALKMVAPGPSSDINREYFAQN
NERAIEEGRAGVEEYEKTDEKARELLRRLAASKPYFRKGRPVEGLNNDAQSGSSSRGGVG
GNPVVGAGVGGPGPIRTRDSRAAAAVGARSGRSKQAFPSAAQLPPGPQDWMPPADKNIMS
LFVTGVEDDLPEHKIREFFKAHGKIKSLVCSHMSHCAFVNYDTREAAEKAAAACQGRAVI
AGCPLRVRWGVPKAIGTMDKEQRSQMLTDARRGQGGARGGDGRGGRKQVSGDSGIGDAAQ
PSVAPAVALPPGADDGFKYASLQGD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccaaatcaaacaggacctgaaccgctcaggttgggaatctaccgatttcccg
tccgtttgcgaaaactgcttgcccgagaatccttacgtcaagatgctcaaggaggattat
ggcgccgagtgtaaattgtgtactagaccgttcaccgtcttcagctggagcgctgatcga
gcccacggtcgaaagaagcgaacgaacatctgcctgacatgcgcacgactcaaaaactgc
tgtcaggcctgtatgttagatctttcatttggtctgcccattgtcgttcgcgatgccgcc
ctcaagatggtagcccccgggccatcgtccgacatcaatcgtgaatactttgcgcaaaac
aacgagcgcgccattgaggaaggtcgtgcaggagtcgaagagtacgagaagacggacgag
aaagccagagagctgctccgaaggctagcggcaagcaagccttattttcgaaagggtcga
cctgttgagggcctgaacaacgatgctcaatcaggctcaagctcaagaggtggggtcggc
ggtaaccccgttgtgggtgccggtgttggtggaccaggtccgatacggacgagagattcc
agggcagcagctgctgttggtgccaggtcaggcagatcgaagcaggcatttcccagcgct
gcccaattgccccctgggccgcaggactggatgccacccgccgataaaaacattatgtcc
ctctttgtcaccggcgtcgaagacgatttgcctgagcacaaaatccgcgagtttttcaaa
gcgcatggcaaaatcaagagtttggtttgttcgcatatgtcccactgcgcatttgtcaac
tacgacactagggaggcggctgagaaggccgccgcggcgtgccagggtcgagccgtgatc
gcaggatgccctttgcgtgttcgctggggtgttcctaaggcgatcggtactatggacaag
gagcagcggtctcaaatgcttacggatgctcggagagggcagggaggcgcgcgaggcgga
gatggaaggggtggacgtaagcaggtcagtggtgattccggcatcggagatgctgctcaa
ccgtcagttgcaccggcggttgcgctccctccgggtgcagacgatggtttcaagtacgca
agtcttcaaggtgattag
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