Colletotrichum higginsianum: CH63R_07690 Help Entry CH63R_07690       CDS       T08176                                  Name (RefSeq) Pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism chig  Colletotrichum higginsianum Pathway chig03040   Spliceosome Brite KEGG Orthology (KO) [BR:chig00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CH63R_07690  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:chig03019]     CH63R_07690    03041 Spliceosome [BR:chig03041]     CH63R_07690 Messenger RNA biogenesis [BR:chig03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      CH63R_07690 Spliceosome [BR:chig03041]  Complex B   Other components    Prp19-related factors     CH63R_07690  Complex C     CH63R_07690 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_2 TPR_10 RPN7 ARM_TT21 NRDE-2 Motif Other DBs NCBI-GeneID:  28866772 NCBI-ProteinID:  XP_018157443 UniProt:  A0A1B7YAE4 LinkDB All DBs Position 5:complement(2699114..2701716) Genome browser AA seq 822 aa AA seqDB search MPASVLLNGSQRRPDLHLVGDEDSVYEQDVIRNPGSIKPWLAYIQFKSQHGTVHERAFVL ERACLQLPRSYKLWKMYLTFRVQHVSKLNASVFSAEYRKVNALFERALILLNKMPRIWEL YLKFLLQQPLVTTTRRTFDRALRALPLTQHNRIWSLYKPFANSIAGISAVKVWRRYMQIH PEDAEDFIELLTQAGFYTEAVKKYMDVLNNPRFTSKQGKGHYELWSEMVDLMVEHAADIE TGHETGIDVDRIVRSGIVRFADQRGKLWCGLATYWIRRGNFERARDVFEEAITTVMTVRD FTLVFDSYTEFEESIIGALMEVASDRADKGIVDEEADFELDIRMMRFEQLMDRRPFLLND VVLRQNPNNVSEWEKRVALWGDNKFEVVQTYTAAIATIQPKKAIGAFHQLWANYAKFYER GGDVRNARVIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRST VDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLEDTRKVYERIFELRIATPQTVVNYAN LLEEHQYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQAIEDCP PKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLPST RPIYEKAISTLPDNEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPDFWAKWE AFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRRPEESIDPEAADAMAAL ERQAKAPVGFVAASDAAKTTNEAEAPTVTANPDAIDIDDLDE NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atgcctgcctcagtgcttctcaacggctctcagagacgtccagacctgcacctggttggc gacgaagactccgtttacgagcaagacgtcatccgcaaccccggaagcatcaagccatgg ctcgcctacatccagttcaagtcgcaacatgggaccgtacacgagcgcgccttcgtgctc gagcgcgcctgtcttcagctcccccgatcatataagctttggaagatgtatcttactttt cgagtccaacacgtttcgaagctgaacgccagcgtcttttctgccgaataccgcaaggtt aacgcccttttcgagcgcgcgctgatccttttgaacaagatgcctcggatctgggaactg tatctgaaattcctgcttcaacagcctcttgttacgaccacacggcgaactttcgatcgg gctcttcgcgcactgcctctcacccagcacaaccgaatctggtctctctacaagcccttc gccaattccattgcaggaatcagcgccgtcaaggtgtggcgccgctacatgcagattcac cccgaggacgccgaagacttcatagaacttctcacccaggcgggcttctacacagaggcc gtcaagaaatacatggatgtcctcaacaatccgcgattcacaagcaagcagggaaaaggg cattacgaactgtggagcgaaatggtcgacctgatggttgaacatgcggctgacatcgag actggccatgagactggcatcgatgtagacaggatcgttagaagcggtattgtccgtttt gccgatcaacgagggaagctatggtgtggtctggccacatattggatacggaggggcaac ttcgagcgcgctagggatgtatttgaagaagctatcaccacggtgatgaccgtccgagac ttcactcttgtttttgactcatatactgagttcgaggagtctatcattggagctctgatg gaggtcgcctcagatcgcgcggacaagggtattgttgacgaggaggcggatttcgaactc gacatcagaatgatgcggttcgagcaactcatggaccggagaccttttcttctcaacgat gtcgtcctgcgccagaaccccaacaatgtgtcggaatgggagaagagggttgccctttgg ggcgacaacaagtttgaggtggtccagacgtatacggccgccatcgcgacaatacagcca aagaaggccataggggcattccaccagctctgggcaaactatgccaaattctacgagcgc gggggcgacgtacggaacgcgcgcgtcatcatggagaaagctgtcaaggttccgttcaag tccgttgcggaactggctgacatgtggattgaatgggccgagatggaactgaggaacgaa aactttgatgatgccgttcggatcatggcaaaggcggtgcaagcgccgaagagatcgaca gttgactattttgatgagacgttgtcaccacagcagcgtgtgcacaagagctggaagctc tggagcttctacgtggacctcgtcgagagtgtcagctctctggaggatactcggaaggtg tacgagcgcattttcgaactgcggattgctacgccgcaaacagtggtcaactacgccaat ctgttggaggaacaccagtactacgaggagtcgttcaaaatctacgaacgaggcttggat ctcttcagctacccggtcgcctttgagctatggaatctgtacctcacaaaggccgtcgat cgcaagattggcatcgaacgtctgcgcgacctctttgagcaggctatcgaggactgtccg cccaaatttgccaaggttatttacctcatgtatggcaacttggaggaggagcggggtctt gcaaggcacgccatgcgaatctacgaacgcgcgaccagggcggtggcggatgaggaccgg gcggacatgttcaatttttacatcaccaagtcggcatccaactttgggctgccgtcgacg agacccatctacgaaaaggccatatccaccttacccgacaatgaggcacgggacatgtgc ctaaagtttgccgacatggagaagcgccttggcgagatcgatcgggcgcgggctatctat ggtcacgcgtcacagttttgcgacccacgcaccagtccagacttttgggcgaaatgggag gcgttcgaggtgcagcacggcaacgaggacacgtttaaggagatgctgcggatcaagcgg agcgtgcaggcgcagtacaacaccgacgtcaacttcatcgcgtcgcaggccctcgcacgc agccaacggcgaccagaggagtcgatcgatcctgaggcggccgatgctatggcagcgctc gagcgacaggcgaaggcgcccgttgggttcgtggcggccagcgatgccgccaagacaacc aacgaagccgaggcaccaactgtaacggcaaatccggatgccatcgacatcgatgaccta gacgagtaa

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