KEGG   Colletotrichum higginsianum: CH63R_07696
Entry
CH63R_07696       CDS       T08176                                 
Name
(RefSeq) 3' exoribonuclease
  KO
K12587  exosome complex component MTR3
Organism
chig  Colletotrichum higginsianum
Pathway
chig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH63R_07696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_07696
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CH63R_07696
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 28866778
NCBI-ProteinID: XP_018157449
UniProt: A0A1B7YA08
LinkDB
Position
5:2716047..2716972
AA seq 291 aa
MTDRRRINGPPGATLPPVYDISNQTSASRARPGNTIRGLFLKTGVTPTASGSAYMEIEPP
YGHVSSKSKVNGMKLICTVHGPRSLPRSAPFSPYLVLSTHVKYAPFATRQRRSYLRDSSE
RDISVHLDTALRGVIIADRWPKSGVDVIVTIIEGDQEREASHFQGNEEWDMMNVLSGCVT
VAAAALADAGIDCVDMVTGGVAALVASDKGDTNTPSIVLDPVSLEHESILAACCVAYLPN
RAEITNLWVKGQLPPSDASLHTKLIGRAIQASKGNYRAVLERLQNNQPPNS
NT seq 876 nt   +upstreamnt  +downstreamnt
atgactgatcggcggagaatcaacgggccgcccggcgcaacattgccaccggtctacgat
atcagcaaccaaacctcggcctctcgggcaaggccaggaaataccattcggggcttgttc
ctcaagactggcgtgaccccgacggcatcgggttcagcctacatggaaatcgaaccgcct
tacggtcatgtgagctcaaagtccaaggtcaacgggatgaagctcatctgcaccgttcat
gggcctcgttccctcccacgatctgcaccattctcaccctatttggtactctcaacccac
gtcaaatacgctcctttcgctacgcgtcaacgccgcagctatcttcgcgactcgagtgaa
agggacatcagcgtccaccttgacacggctcttcgtggagtcatcatcgctgaccgatgg
cccaagagtggcgttgatgttattgttaccatcatcgaaggtgatcaggagcgagaagcc
tctcattttcaaggcaacgaggaatgggatatgatgaacgttctcagtgggtgcgtcacc
gttgccgcagccgctcttgcggatgctggcattgattgtgtggacatggtcacaggcggt
gttgcagctcttgtcgcttcagataagggcgacacgaacacgccatccattgtgctggat
ccagtctccctggaacacgagagtattctggctgcctgttgtgttgcctacttgcccaat
cgcgctgagattaccaacctctgggtaaaaggccaacttccgccgtccgacgcgtcgttg
catacaaaactcataggccgtgccattcaagcttccaagggcaactaccgtgctgttctt
gaaagactacaaaacaaccaaccgcctaacagctag

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