Colletotrichum higginsianum: CH63R_07698
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Entry
CH63R_07698 CDS
T08176
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chig03016
]
CH63R_07698
Enzymes [BR:
chig01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CH63R_07698
Transfer RNA biogenesis [BR:
chig03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
CH63R_07698
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
HemY_N
Motif
Other DBs
NCBI-GeneID:
28866780
NCBI-ProteinID:
XP_018157451
UniProt:
H1VFH6
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Position
5:complement(2721289..2722170)
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AA seq
293 aa
AA seq
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MSTSNATKVPLVRISKIADRYLVFDAQDVAVIRRDHNICSVLVGTTPQNPTQNVFLSLPL
ELLPEEASVLVEKKVGRLVDETSHHLSSLRSSDKATRQGYIALLKDRRHKAQKLLAEDHV
KKAATEQTRRAKGAMASPAAPEADDLFGLFSPGTPAHDSRGKSRDSADVNLSLTVTPTTS
CGLQAPGGGACDAVRLPAAGALHRHLQSKGYFMTPGLRFGADYSVYPGDPLRFHAHFLAT
NYAWDEKIPMLDVVGSGRLGTSVKKGFLFGGEVPFMDESPKRVRAFCVEWAGM
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcaaatgcgacaaaggtcccactggtgcgcatctccaagatcgcagaccgc
tatctcgtcttcgatgctcaagacgtggccgtaattaggcgcgatcacaatatctgctcc
gtgttggtgggaaccacaccccagaacccaacgcaaaatgtgttcttgagtctgccgctt
gagctacttccggaggaggccagcgtgctcgtcgagaagaaggtaggccgtctcgtcgac
gagacttcacaccacttgtcgtcgcttcgctcctcggacaaagctacccgtcagggatac
attgcacttctaaaggaccgccgtcacaaggctcagaagctattggccgaggatcatgtc
aagaaggcagcgactgaacagactcggagggcgaagggcgccatggcatctcctgccgcc
ccagaagctgatgacctgttcggtttgttttccccaggaacgcccgcgcatgacagtcgt
ggtaaatctcgcgattctgccgatgtcaatttgtccttgacggtcacgcccacaacaagc
tgtgggttgcaagcaccggggggcggtgcatgtgacgccgtgcgtctgcctgctgccggc
gctctgcatcgacacttgcagtcaaagggatatttcatgacgcctggtttgcggttcggc
gccgactatagtgtctatcctggtgacccactaagattccatgctcacttcctcgccaca
aactacgcctgggacgaaaaaatacccatgcttgatgttgttggcagcggtcgcttgggc
acatcggtcaagaagggtttcttatttggcggcgaggttccattcatggatgaatcgccg
aaacgggtgcgcgcattttgtgttgaatgggctgggatgtag
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